RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 BRINP1O60477 761 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 HPNP05981 417 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SELPP16109 830 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 GLRA1P23415 457 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 ACKR3P25106 362 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 CARD17Q5XLA6 110 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM225Q6GV28 225 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SLC22A24Q8N4F4 322 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 ZDHHC22Q8N966 263 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 RCBTB1Q8NDN9 531 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 NUDT9Q9BW91 350 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 PTGES2Q9H7Z7 377 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 UBQLN4Q9NRR5 601 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 HS3ST2Q9Y278 367 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
COL28A1-201ENST00000399429 MCM3APO60318 1980 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 RNF222A6NCQ9 220 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 MSTNO14793 375 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 HBE1P02100 147 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 CTSEP14091 401 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 RPS15AP62244 130 aaKnown RBP8.41□□□□□ -1.06
COL28A1-201ENST00000399429 IL10RAQ13651 578 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SLC10A1Q14973 349 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF74Q16587 644 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SP6Q3SY56 376 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 WDR38Q5JTN6 314 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 DBX2Q6ZNG2 339 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 SLC25A42Q86VD7 318 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 CLEC1AQ8NC01 280 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 POMT1Q9Y6A1 747 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 NHSL1Q5SYE7 1610 aa8.41□□□□□ -1.06
COL28A1-201ENST00000399429 AQP7O14520 342 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 APBB3O95704 486 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PNMTP11086 282 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 DLK1P80370 383 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 TLE1Q04724 770 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ERN2Q76MJ5 926 aaKnown RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PRR22Q8IZ63 422 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 WFIKKN2Q8TEU8 576 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 FGF13Q92913 245 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 RAB7BQ96AH8 199 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 CHST11Q9NPF2 352 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 LANCL2Q9NS86 450 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 V9GYS6 101 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 SEC16AO15027 2179 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 CCDC187A0A096LP49 1063 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 CDRT15L2A8MXV6 281 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 H3BQ15 152 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 RPL19P84098 196 aaKnown RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 DEFB110Q30KQ9 67 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 TOMM20LQ6UXN7 152 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF440Q8IYI8 595 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 KREMEN2Q8NCW0 462 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 OR5L1Q8NGL2 311 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 TGM7Q96PF1 710 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 SPOCK3Q9BQ16 436 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 OR14J1Q9UGF5 321 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 OR52A1Q9UKL2 312 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 GPR34Q9UPC5 381 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ANKUB1A6NFN9 424 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 E5RGE8 158 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 CLDN34H7C241 214 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PHF1O43189 567 aaPredicted RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 RAD51DO75771 328 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 SLC2A1P11166 492 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ADCYAP1P18509 176 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 HNF1AP20823 631 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PTTG1IPP53801 180 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 NAAAQ02083 359 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 FOXO1Q12778 655 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 GPX8Q8TED1 209 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PGAM5Q96HS1 289 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 SERINC2Q96SA4 455 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 SLC25A31Q9H0C2 315 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF442Q9H7R0 627 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PLEKHA2Q9HB19 425 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 CBLN4Q9NTU7 201 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 NSG2Q9Y328 171 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 LIPGQ9Y5X9 500 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 HEBP2Q9Y5Z4 205 aa8.4□□□□□ -1.06
COL28A1-201ENST00000399429 PRKNO60260 465 aaPredicted RBP8.4□□□□□ -1.07
COL28A1-201ENST00000399429 ADAMTS4O75173 837 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 PNPP00491 289 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 CD74P04233 296 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 HSD11B2P80365 405 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 CCINQ13939 588 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 TOMM20Q15388 145 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 KIRREL2Q6UWL6 708 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 CLEC18BQ6UXF7 455 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 OR2L13Q8N349 312 aa8.4□□□□□ -1.07
COL28A1-201ENST00000399429 ZSCAN4Q8NAM6 433 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms