RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF385BQ569K4 471 aa12.9□□□□□ -0.35
PCDHA11-201ENST00000398640 TMEM81Q6P7N7 255 aa12.9□□□□□ -0.35
PCDHA11-201ENST00000398640 OR51S1Q8NGJ8 323 aa12.9□□□□□ -0.35
PCDHA11-201ENST00000398640 K7EQM0 130 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 NID1P14543 1247 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 GPR12P47775 334 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 OPCMLQ14982 345 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 ADIRFQ15847 76 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 ISL2Q96A47 359 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 NMES1Q9C002 83 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 F6UZH7 168 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 CDC14BO60729 498 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 CPEP16870 476 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 ETV1P50549 477 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 FLI1Q01543 452 aaPredicted RBP12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 RSPO4Q2I0M5 234 aaPredicted RBP12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 LIPNQ5VXI9 398 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 TCRBP04435 133 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 GLAP06280 429 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 ELK1P19419 428 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 FUNDC1Q8IVP5 155 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 NT5CQ8TCD5 201 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 MITD1Q8WV92 249 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 IGHV5-51A0A0C4DH38 117 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 FABP7O15540 132 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 TBPP20226 339 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 CASP3P42574 277 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 SUB1P53999 127 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 P2RX3P56373 397 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 Q6ZRG5 221 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 GPR87Q9BY21 358 aa12.89□□□□□ -0.35
PCDHA11-201ENST00000398640 M0R135 149 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 HBE1P02100 147 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 OR1J1Q8NGS3 322 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNF799Q96GE5 643 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 LRFN5Q96NI6 719 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 ASIC5Q9NY37 505 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 FYTTD1Q96QD9 318 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 LAT2Q9GZY6 243 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 ISYNA1Q9NPH2 558 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 KCNG2Q9UJ96 466 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 RPL18Q07020 188 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 TFAP2EQ6VUC0 442 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 LGI3Q8N145 548 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 SLC35E1Q96K37 410 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 POLDIP2Q9Y2S7 368 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 CHST2Q9Y4C5 530 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 WDR1O75083 606 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 SDHAP31040 664 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNF2Q9BSG1 426 aaPredicted RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 ADAM19Q9H013 955 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 DOCK5Q9H7D0 1870 aa12.88□□□□□ -0.35
PCDHA11-201ENST00000398640 M0QZ24 198 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FCMRO60667 390 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 NRASP01111 189 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 ALOX5APP20292 161 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PPICP45877 212 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PSMB3P49720 205 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FOXF1Q12946 379 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 WDR74Q6RFH5 385 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 SVBPQ8N300 66 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FGF11Q92914 225 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OXGR1Q96P68 337 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 C11orf54Q9H0W9 315 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 GPR84Q9NQS5 396 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 MBD1Q9UIS9 605 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 VAMP5O95183 116 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR13C7P0DN81 318 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 GPX2P18283 190 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 ACHEP22303 614 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 UBE2IP63279 158 aaKnown RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 RTL8BQ17RB0 113 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 TMEM211Q6ICI0 200 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 MOB3BQ86TA1 216 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 CLDN22Q8N7P3 220 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PSD2Q9BQI7 771 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 LIPAP38571 399 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 MAGEB1P43366 347 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms