RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SNRPGP62308 76 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 HBA1P69905 142 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 LCN2P80188 198 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR5I1Q13606 314 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 IL10RAQ13651 578 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CLINT1Q14677 625 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TCTEX1D4Q5JR98 221 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 NXNL2Q5VZ03 156 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 C22orf39Q6P5X5 142 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 Q6ZVU0 165 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ARL14EPQ8N8R7 260 aaPredicted RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ATP6V1C2Q8NEY4 427 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 WBP2Q969T9 261 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TCTN2Q96GX1 697 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR2A14Q96R47 310 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 POLR2J3Q9H1A7 115 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB18Q9NP72 206 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CFAP20Q9Y6A4 193 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 IQCMA0A1B0GVH7 501 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HSPB2A8KAH6 182 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 A8MZ25 164 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF670-ZNF695F2Z2N8 137 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FAAHO00519 579 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 IRF2P14316 349 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC6A11P48066 632 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HSD11B2P80365 405 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MLLT11Q13015 90 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 KIAA0141Q14154 515 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TAF13Q15543 124 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HSPB2Q16082 182 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 PYDC2Q56P42 97 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CHMP1BQ7LBR1 199 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LINC01551Q86U37 167 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LAPTM4BQ86VI4 370 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC44A3Q8N4M1 653 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MRAPQ8TCY5 172 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HPSE2Q8WWQ2 592 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM131CQ96AQ9 280 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 KCTD7Q96MP8 289 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TGM7Q96PF1 710 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NUDT9Q9BW91 350 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SRD5A3Q9H8P0 318 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TAS2R16Q9NYV7 291 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CGGBP1Q9UFW8 167 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 V9GYS6 101 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SCN8AQ9UQD0 1980 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LOC102723996A0A087X1L8 192 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FIGNL2A6NMB9 653 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 M0R129 80 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 H1F0P07305 194 aaKnown RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HOXB2P14652 356 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FOLR1P15328 257 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SDC2P34741 201 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NPBWR2P48146 333 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MC2RQ01718 297 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 UBE2V1Q13404 147 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MAPK14Q16539 360 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NKAPLQ5M9Q1 402 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ACSM6Q6P461 480 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 C19orf48Q6RUI8 117 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 OR4E2Q8NGC2 313 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 OR51S1Q8NGJ8 323 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 WFDC5Q8TCV5 224 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SCMH1Q96GD3 660 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB40CQ96S21 281 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TBX5Q99593 518 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MAP1LC3CQ9BXW4 147 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 BARHL1Q9BZE3 327 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 DNAJC27Q9NZQ0 273 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF222Q9UK12 451 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZZEF1O43149 2961 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CCDC88CQ9P219 2028 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF292O60281 2723 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CXorf51AA0A1B0GTR3 108 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 C13orf42A0A1B0GVH6 325 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LEFTY2O00292 366 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ARPC1BO15143 372 aaKnown RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 YY2O15391 372 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 RS1O15537 224 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ENTPD6O75354 484 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 OR2F2O95006 317 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CDRT1O95170 752 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ASCL1P50553 236 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MXD1Q05195 221 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF658BQ4V348 819 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CT83Q5H943 113 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF770Q6IQ21 691 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LINC00471Q8N535 108 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM251Q8N6I4 163 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 OR6N1Q8NGY5 312 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 XAGE5Q8WWM1 108 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 REEP6Q96HR9 211 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SSBP4Q9BWG4 385 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TSSK6Q9BXA6 273 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 MRPL17Q9NRX2 175 aaKnown RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FTSJ1Q9UET6 329 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SS18L2Q9UHA2 77 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 PRR19A6NJB7 356 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms