RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 IGLV3-1P01715 115 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 RAF1P04049 648 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 DBHP09172 617 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 CCL1P22362 96 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 MAPK3P27361 379 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 SDC2P34741 201 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 HTR5AP47898 357 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 TPTEP56180 551 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 RAB1AP62820 205 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 DGUOKQ16854 277 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 ZNF474Q6S9Z5 364 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 C17orf78Q8N4C9 275 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 OR51A4Q8NGJ6 313 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 PIGMQ9H3S5 423 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 RNF121Q9H920 327 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 ZNF319Q9P2F9 582 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 HHLA2Q9UM44 414 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 A3GALT2U3KPV4 340 aa16.97■□□□□ 0.31
PDLIM2-205ENST00000397761 A0A0U1RQV5 110 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 A0A1B0GTI1 187 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 LOC107986453A0A1B0GWG9 222 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 RAD51DO75771 328 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 CDRT1O95170 752 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 OCM2P0CE71 109 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 ANOS1P23352 680 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 CALRP27797 417 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 CA7P43166 264 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 HGFACQ04756 655 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 GSG1Q2KHT4 349 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 SFRP5Q5T4F7 317 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 NAA40Q86UY6 237 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 TPRA1Q86W33 373 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 SLC25A46Q96AG3 418 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 NXF2Q9GZY0 626 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 BRD7Q9NPI1 651 aa16.96■□□□□ 0.31
PDLIM2-205ENST00000397761 SLC2A1P11166 492 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 CD79AP11912 226 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 MAGEB1P43366 347 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 LSAMPQ13449 338 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 ODF4Q2M2E3 257 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 TMEM211Q6ICI0 200 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 Q6ZSR3 168 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 CXorf67Q86X51 503 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF584Q8IVC4 421 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 OR52H1Q8NGJ2 320 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 ASB5Q8WWX0 329 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 NOX4Q9NPH5 578 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 OBP2BQ9NPH6 170 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 MEMO1Q9Y316 297 aa16.95■□□□□ 0.3
PDLIM2-205ENST00000397761 LOC100509620A0A075B734 347 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 CIB4A0PJX0 185 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 P2RY10O00398 339 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 ANXA2P07355 339 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 HSD17B12Q53GQ0 312 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 COLCA1Q6ZS62 124 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 FAM57BQ71RH2 274 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 MRGPRGQ86SM5 289 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 WDR31Q8NA23 367 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 PLPP7Q8NBV4 271 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 TMEM106AQ96A25 262 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 BARHL1Q9BZE3 327 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 JKAMPQ9P055 326 aa16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 HEATR1Q9H583 2144 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-205ENST00000397761 A8MXE2 369 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 CLPXO76031 633 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 CLEC2LP0C7M8 214 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 PSMB1P20618 241 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 MYL9P24844 172 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 APEX1P27695 318 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SLC6A9P48067 706 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 CASP6P55212 293 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 PLP2Q04941 152 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 ESPL1Q14674 2120 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 C1QTNF12Q5T7M4 302 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 LINC00299Q6ZSB3 139 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 MDP1Q86V88 176 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 PGAM5Q96HS1 289 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 POM121L2Q96KW2 1035 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 TSC22D3Q99576 134 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 KCNS3Q9BQ31 491 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 C1QTNF5Q9BXJ0 243 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SP140LQ9H930 580 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SLC24A3Q9HC58 644 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SNTG1Q9NSN8 517 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 C5orf63A6NC05 138 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 CASKO14936 926 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SERPINA5P05154 406 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 ZNF14P17017 642 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SRMP19623 302 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 STOMP27105 288 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SOX6P35712 828 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 SOX2P48431 317 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 RORCP51449 518 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 UBE2NP61088 152 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 MXD1Q05195 221 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 TSC22D1Q15714 1073 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 STAC2Q6ZMT1 411 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 BHLHA15Q7RTS1 189 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 NR2C2APQ86WQ0 139 aa16.93■□□□□ 0.3
PDLIM2-205ENST00000397761 OR51E1Q8TCB6 317 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms