RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SLC35F2Q8IXU6 374 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 PACRGLQ8N7B6 248 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 OR51G2Q8NGK0 314 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 RFKQ969G6 155 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 HAVCR1Q96D42 359 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 TMUB1Q9BVT8 246 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 TTTY10Q9BZA0 68 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 CGGBP1Q9UFW8 167 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 N6AMT1Q9Y5N5 214 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 TMEM14AQ9Y6G1 99 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 MED13LQ71F56 2210 aa18.08■□□□□ 0.48
TSPAN4-206ENST00000397408 CHD3Q12873 2000 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-206ENST00000397408 LOC100130705A0A1B0GUX0 176 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 ZSCAN5BA6NJL1 495 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 H7C1Q1 480 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 CASQ2O14958 399 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 CSF3P09919 207 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 DAOP14920 347 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 MAGEB1P43366 347 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 DSCR9P59020 149 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 SNRPGP62308 76 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 CARTPTQ16568 116 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 OGFRL1Q5TC84 451 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 FAM168AQ92567 244 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 RHNO1Q9BSD3 238 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 MSL2Q9HCI7 577 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 CYSLTR2Q9NS75 346 aa18.07■□□□□ 0.48
TSPAN4-206ENST00000397408 IGHV4-30-2A0A087WSY4 118 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 C5orf63A6NC05 138 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 SPRY3O43610 288 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ENTPD6O75354 484 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 NCR1O76036 304 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 APOL3O95236 402 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 APOC1P02654 83 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ANXA2P07355 339 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 SBK2P0C263 348 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 LIPAP38571 399 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 PDLIM4P50479 330 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 PRSS12P56730 875 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 GK2Q14410 553 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ZMAT1Q5H9K5 638 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 OR2T2Q6IF00 324 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 KRT77Q7Z794 578 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 OR5AS1Q8N127 324 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 RFLNBQ8N5W9 214 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ZNF555Q8NEP9 628 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 MYOZ1Q9NP98 299 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 NKX1-2Q9UD57 310 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 LRP12Q9Y561 859 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 TEP1Q99973 2627 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 PRR32B1ATL7 298 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 PSMD9O00233 223 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 SLC16A6O15403 523 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 TBX1O43435 398 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 IGHV1-46P01743 117 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 HPXP02790 462 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ZNF121P58317 390 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 CCL8P80075 99 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 POU4F2Q12837 409 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 PCGF3Q3KNV8 242 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 SLC25A30Q5SVS4 291 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 GLYATL3Q5SZD4 288 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 KCTD18Q6PI47 426 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 MRPL21Q7Z2W9 205 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ENTHD1Q8IYW4 607 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 CIARTQ8N365 385 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 OR2AE1Q8NHA4 323 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 UBASH3BQ8TF42 649 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ASB17Q8WXJ9 295 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 MNTQ99583 582 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 BRD7Q9NPI1 651 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 DLL4Q9NR61 685 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 CLN6Q9NWW5 311 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 AASSQ9UDR5 926 aa18.06■□□□□ 0.48
TSPAN4-206ENST00000397408 ZNF670-ZNF695F2Z2N8 137 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 H0YHG0 523 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 GABRB1P18505 474 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 ATP6V1E1P36543 226 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 PSMA6P60900 246 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 CXCR4P61073 352 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 ZNF92Q03936 586 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 TMED1Q13445 227 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 OCLNQ16625 522 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 TSTQ16762 297 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 MEDAGQ5VYS4 303 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 USP51Q70EK9 711 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 FAM57BQ71RH2 274 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 PGAP1Q75T13 922 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 C10orf105Q8TEF2 133 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 OR8B4Q96RC9 309 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 TBX5Q99593 518 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 NKIRAS2Q9NYR9 191 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 IKZF2Q9UKS7 526 aa18.05■□□□□ 0.48
TSPAN4-206ENST00000397408 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■□ 25.9
TSPAN4-206ENST00000397408 RNF223E7ERA6 249 aa18.04■□□□□ 0.48
TSPAN4-206ENST00000397408 PHYHO14832 338 aa18.04■□□□□ 0.48
TSPAN4-206ENST00000397408 SMAD7O15105 426 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-206ENST00000397408 TPD52L2O43399 206 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-206ENST00000397408 SELEP16581 610 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms