RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 APLNRP35414 380 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 SLC6A9P48067 706 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 GALK2Q01415 458 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 MFGE8Q08431 387 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 DYNC1I2Q13409 638 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 DOK3Q7L591 496 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 PRSS45Q7RTY3 260 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 ZGRF1Q86YA3 2104 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 ZNF610Q8N9Z0 462 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 NAXEQ8NCW5 288 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 STEAP2Q8NFT2 490 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 PGAM5Q96HS1 289 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 DERL3Q96Q80 235 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 TSC22D3Q99576 134 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 DCUN1D5Q9BTE7 237 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 MMP27Q9H306 513 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 SNTG1Q9NSN8 517 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 TINAGQ9UJW2 476 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 MEMO1Q9Y316 297 aa16.6■□□□□ 0.25
TSPAN4-204ENST00000397404 A8MXE2 369 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TTRP02766 147 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 ACSM4P0C7M7 580 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TUBG1P23258 451 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 STOMP27105 288 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 PRKXP51817 358 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TIMM23BQ5SRD1 257 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 C9orf135Q5VTT2 229 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 PCSK4Q6UW60 755 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 Q6ZSR3 168 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 BHLHA15Q7RTS1 189 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TSEN15Q8WW01 171 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 HTRA1Q92743 480 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TMEM106AQ96A25 262 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 KCTD12Q96CX2 325 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TRMT61AQ96FX7 289 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 MRI1Q9BV20 369 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TUBG2Q9NRH3 451 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 FOXJ3Q9UPW0 622 aa16.59■□□□□ 0.25
TSPAN4-204ENST00000397404 TRBV5-7A0A0A0MS05 114 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 MEGF11A6BM72 1044 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 ATXN7O15265 892 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 XRCC2O43543 280 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 SYT7O43581 403 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 ICMTO60725 284 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 CLPXO76031 633 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 CDRT1O95170 752 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 IGLV3-1P01715 115 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 HLA-HP01893 362 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 CBR1P16152 277 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 SRMP19623 302 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 FSTP19883 344 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 IL32P24001 234 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 PCSK6P29122 969 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 ASB5Q8WWX0 329 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 OR14A2Q96R54 314 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 C1QTNF5Q9BXJ0 243 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 TCF7L1Q9HCS4 588 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 JKAMPQ9P055 326 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 CRNNQ9UBG3 495 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 POLEQ07864 2286 aa16.58■□□□□ 0.24
TSPAN4-204ENST00000397404 A0A075B6Q4 140 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 TRGV8A0A0C4DH27 118 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 A0A0G2JNJ9 132 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 LOC107986453A0A1B0GWG9 222 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 OR5H1A6NKK0 313 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 RAD51DO75771 328 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 LYZL6O75951 148 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 SDC2P34741 201 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 FOXG1P55316 489 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 TBC1D28Q2M2D7 210 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 RSPO1Q2MKA7 263 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 ZNF404Q494X3 552 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 HIKESHIQ53FT3 197 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 SOWAHCQ53LP3 525 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 COLCA1Q6ZS62 124 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 PLPP7Q8NBV4 271 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 OR8B12Q8NGG6 310 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 OR5L1Q8NGL2 311 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 AKR7LQ8NHP1 331 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 ACOT12Q8WYK0 555 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 RGP1Q92546 391 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 AKAP1Q92667 903 aaKnown RBP eCLIP16.57■□□□□ 0.247e-7■■■■□ 20.3
TSPAN4-204ENST00000397404 APOBEC3DQ96AK3 386 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 LRRC46Q96FV0 321 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 KCNS3Q9BQ31 491 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 NXF2Q9GZY0 626 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 OPN3Q9H1Y3 402 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 SLC24A3Q9HC58 644 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 Q9UFV3 132 aa16.57■□□□□ 0.24
TSPAN4-204ENST00000397404 IGKV3-15P01624 115 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 RPS19P39019 145 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 SLC25A35Q3KQZ1 300 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 FAM57BQ71RH2 274 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 PGAP1Q75T13 922 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 CXorf67Q86X51 503 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 SERPINA12Q8IW75 414 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 RPRMLQ8N4K4 120 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 PARP16Q8N5Y8 322 aa16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 SLIRPQ9GZT3 109 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-204ENST00000397404 NEK6Q9HC98 313 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms