RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TBC1D15Q8TC07 691 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 Q8TCH9 128 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 SSMEM1Q8WWF3 244 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ACOT11Q8WXI4 607 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-208ENST00000397204 TPD52L3Q96J77 140 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ATP6V1G3Q96LB4 118 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 Q96M85 177 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 SIKE1Q9BRV8 207 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 HCAR1Q9BXC0 346 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 CHIAQ9BZP6 476 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 NMNAT1Q9HAN9 279 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-208ENST00000397204 INTS9Q9NV88 658 aaKnown RBP7.28□□□□□ -1.24
CAPN3-208ENST00000397204 PTTG3PQ9NZH4 202 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ASH2LQ9UBL3 628 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 COA3Q9Y2R0 106 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ADAM18Q9Y3Q7 739 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 TANC2Q9HCD6 1990 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 CENPVL3A0A0U1RRI6 287 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ZNF879B4DU55 563 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 F5H5P2 479 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 FXYD1O00168 92 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 FFAR1O14842 300 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RER1O15258 196 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 MLNRO43193 412 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 NDUFA2O43678 99 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 IFNW1P05000 195 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 MELTFP08582 738 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 DBHP09172 617 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ZNF26P17031 533 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 FPR3P25089 353 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 PSMB10P40306 273 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 KCNJ8Q15842 424 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 TAF9Q16594 264 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 LRRC23Q53EV4 343 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ASPHD2Q6ICH7 369 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 PGM2L1Q6PCE3 622 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 TBPL2Q6SJ96 375 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 LYPD2Q6UXB3 125 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ZNF730Q6ZMV8 503 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 FAM122BQ7Z309 247 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 OR13C2Q8NGS9 318 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 GATAD2BQ8WXI9 593 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 DYRK2Q92630 601 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ZNF570Q96NI8 536 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 COQ7Q99807 217 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RBM4BQ9BQ04 359 aaKnown RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 CDADC1Q9BWV3 514 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 TRIM15Q9C019 465 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 HDHD2Q9H0R4 259 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 SYT4Q9H2B2 425 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ANKRD19PQ9H560 264 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RERGLQ9H628 205 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 MARCH7Q9H992 704 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 TNFRSF19Q9NS68 423 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 GID8Q9NWU2 228 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 VSX1Q9NZR4 365 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 ERVK-18Q9QC07 812 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RHCGQ9UBD6 479 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 TMEM5Q9Y2B1 443 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 AP3M1Q9Y2T2 418 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 NOP16Q9Y3C1 178 aaKnown RBP7.27□□□□□ -1.25
CAPN3-208ENST00000397204 RNF114Q9Y508 228 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 SNX13Q9Y5W8 968 aa7.27□□□□□ -1.25
CAPN3-208ENST00000397204 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 A0A0G2JND7 137 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 IGHV3-64DA0A0J9YX35 117 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 ELOVL7A1L3X0 281 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 BBIP1A8MTZ0 92 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 C22orf46C9J442 243 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 CDC42EP2O14613 210 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 MRASO14807 208 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 EDF1O60869 148 aaKnown RBP7.26□□□□□ -1.25
CAPN3-208ENST00000397204 CLPXO76031 633 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 TOX4O94842 621 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 NDUFB2O95178 105 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 FUT4P22083 530 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 CRABP1P29762 137 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 SDHAP31040 664 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 CFHR2P36980 270 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 CD200P41217 278 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 YAP1P46937 504 aaKnown RBP7.26□□□□□ -1.25
CAPN3-208ENST00000397204 ECH1Q13011 328 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 MAB21L1Q13394 359 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 ADCK1Q86TW2 530 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 PNLDC1Q8NA58 520 aaKnown RBP7.26□□□□□ -1.25
CAPN3-208ENST00000397204 BHLHE23Q8NDY6 225 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 OR2T12Q8NG77 320 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 LINC01006Q8NI28 216 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 WDFY2Q96P53 400 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 PCGF1Q9BSM1 259 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 SLC22A4Q9H015 551 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 NUAK2Q9H093 628 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 NRIP3Q9NQ35 241 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 TRIM36Q9NQ86 728 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 ACOXLQ9NUZ1 547 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 RNF7Q9UBF6 113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms