RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 OPALINQ96PE5 141 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 TNFRSF13CQ96RJ3 184 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 SPNS1Q9H2V7 528 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 EPHX3Q9H6B9 360 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 LMAN1LQ9HAT1 526 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF140P52738 457 aaPredicted RBP9.45□□□□□ -0.9
COL4A4-201ENST00000396625 DGCR2P98153 550 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 SLC35E4Q6ICL7 350 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 OR10C1Q96KK4 312 aa9.45□□□□□ -0.9
COL4A4-201ENST00000396625 KIR2DS5A0A0G2JLQ3 304 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 A0A0G2JNG1 304 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC5A10A0PJK1 596 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 KIR2DS3K7RE56 304 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 WDR1O75083 606 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TPOP07202 933 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 KIR2DS5Q14953 304 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SSX1Q16384 188 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC35D3Q5M8T2 416 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 GDF7Q7Z4P5 450 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 OR4C16Q8NGL9 310 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 LANCL2Q9NS86 450 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 UNCXA6NJT0 531 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TCN2P20062 427 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 OR3A1P47881 315 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 CLDN2P57739 230 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC16A12Q6ZSM3 486 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 DOK3Q7L591 496 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 OR52N1Q8NH53 320 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TAAR6Q96RI8 345 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 GAL3ST2Q9H3Q3 398 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ASIC5Q9NY37 505 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ITGB4P16144 1822 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SERINC4A6NH21 518 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 RRADP55042 308 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ERV3-1Q14264 604 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 LHFPL2Q6ZUX7 228 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 CLEC14AQ86T13 490 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 OR1L3Q8NH93 324 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 PRSS3P2Q8NHM4 247 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 A4GALTQ9NPC4 353 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TBX19O60806 448 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 CALCBP10092 127 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 CLLU1Q5K131 121 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 NEURL3Q96EH8 262 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SEC11CQ9BY50 192 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 CTSFQ9UBX1 484 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF785A8K8V0 405 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 GPR75O95800 540 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SPRED3Q2MJR0 410 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC26A10Q8NG04 563 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 C19orf43Q9BQ61 176 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ZDHHC5Q9C0B5 715 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 RHOFQ9HBH0 211 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
COL4A4-201ENST00000396625 T-ENOLP0DO92 83 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 GLI4P10075 376 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 PSMB5P28074 263 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 RBP2P50120 134 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ZBTB37Q5TC79 503 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TMEM230Q96A57 120 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC46A1Q96NT5 459 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SLC45A1Q9Y2W3 748 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TMED7-TICAM2A0A0A6YYA0 188 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TFAP2AP05549 437 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TAS2R60P59551 318 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 HERVK_113P61574 105 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 PRTGQ2VWP7 1150 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 C19orf47Q8N9M1 422 aaKnown RBP9.44□□□□□ -0.9
COL4A4-201ENST00000396625 C3orf30Q96M34 536 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
COL4A4-201ENST00000396625 PRSS16Q9NQE7 514 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 TMED7Q9Y3B3 224 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 LOC107986453A0A1B0GWG9 222 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ARNTLO00327 626 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 MTURNQ8N3F0 131 aa9.44□□□□□ -0.9
COL4A4-201ENST00000396625 ANK1P16157 1881 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SNRPNP63162 240 aaKnown RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MOB3AQ96BX8 217 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 TRAPPC4Q9Y296 219 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 OR2J2O76002 312 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SEMG1P04279 462 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 PIGAP37287 484 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CD200P41217 278 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CD81P60033 236 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 C17orf67Q0P5P2 114 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MMP11P24347 488 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 BCDIN3DQ7Z5W3 292 aaKnown RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SHANK1Q9Y566 2161 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ACHEP22303 614 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ABCD3P28288 659 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms