RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC2A1P11166 492 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 RAB3BP20337 219 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 APEX1P27695 318 aaKnown RBP11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SOX2P48431 317 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 PABPC1L2AQ5JQF8 200 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF433Q8N7K0 673 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-204ENST00000396548 THRSPQ92748 146 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SOX7Q9BT81 388 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 M0R135 149 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 GLI4P10075 376 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 EPXP11678 715 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 CFL1P23528 166 aaKnown RBP11.08□□□□□ -0.64
TRIM39-204ENST00000396548 GALK2Q01415 458 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SLC36A2Q495M3 483 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SFRP5Q5T4F7 317 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 PARP16Q8N5Y8 322 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZFP3Q96NJ6 502 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SLC25A18Q9H1K4 315 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-204ENST00000396548 PEX16Q9Y5Y5 336 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 LOC100509620A0A075B734 347 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 HLA-HP01893 362 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 KLRB1Q12918 225 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 DYNC1I2Q13409 638 aaKnown RBP11.07□□□□□ -0.64
TRIM39-204ENST00000396548 GABRA6Q16445 453 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 HIKESHIQ53FT3 197 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 FAM57BQ71RH2 274 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF283Q8N7M2 679 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 OR51E1Q8TCB6 317 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 C6orf62Q9GZU0 229 aaPredicted RBP11.07□□□□□ -0.64
TRIM39-204ENST00000396548 BRD7Q9NPI1 651 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 RHBDD3Q9Y3P4 386 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 F5H5K5 113 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 H3BSH0 61 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 ABOP16442 354 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 EIF2S3LQ2VIR3 472 aaKnown RBP11.07□□□□□ -0.64
TRIM39-204ENST00000396548 DPPA2Q7Z7J5 298 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 OR1J2Q8NGS2 313 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 C1QTNF5Q9BXJ0 243 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 CRNNQ9UBG3 495 aaPredicted RBP11.07□□□□□ -0.64
TRIM39-204ENST00000396548 V9GYS6 101 aa11.07□□□□□ -0.64
TRIM39-204ENST00000396548 NOTOA8MTQ0 251 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 APOC1P02654 83 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 TMIGD3P0DMS9 266 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 TBRG1Q3YBR2 411 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 AK6Q9Y3D8 172 aaKnown RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 CHD8Q9HCK8 2581 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 UBL3O95164 117 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 ATF1P18846 271 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 ARR3P36575 388 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 LAX1Q8IWV1 398 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF610Q8N9Z0 462 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 C1orf162Q8NEQ5 155 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 OR13C3Q8NGS6 347 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 OR14K1Q8NGZ2 314 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 TSEN15Q8WW01 171 aaKnown RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 S100ZQ8WXG8 99 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-204ENST00000396548 SOSTQ9BQB4 213 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 GPR84Q9NQS5 396 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 EDN3P14138 238 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 TNFSF8P32971 234 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 HTR5AP47898 357 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 AP3S1Q92572 193 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 SGK3Q96BR1 496 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 POM121L2Q96KW2 1035 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 ABCB9Q9NP78 766 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 CMAHPQ9Y471 501 aa11.06□□□□□ -0.64
TRIM39-204ENST00000396548 CLDN25C9JDP6 229 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 SLC19A2O60779 497 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 TMEM127O75204 238 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
TRIM39-204ENST00000396548 DDOSTP39656 456 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 TPTEP56180 551 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 RAB1AP62820 205 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 TNK1Q13470 666 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-204ENST00000396548 V9GYH0 126 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 PDCD5O14737 125 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 SYT7O43581 403 aa11.05□□□□□ -0.64
TRIM39-204ENST00000396548 SLC2A2P11168 524 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms