RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 KCNJ16Q9NPI9 418 aa-1.24□□□□□ -2.61
SNORA40-201ENST00000388090 STRAPQ9Y3F4 350 aaKnown RBP-1.24□□□□□ -2.61
SNORA40-201ENST00000388090 INTS1Q8N201 2190 aaKnown RBP-1.24□□□□□ -2.61
SNORA40-201ENST00000388090 DENND4AQ7Z401 1863 aa-1.24□□□□□ -2.61
SNORA40-201ENST00000388090 STAB1Q9NY15 2570 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 CFAP73A6NFT4 308 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 CCL21O00585 134 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 FIBPO43427 364 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 OR1F1O43749 312 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 CDH16O75309 829 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 BCAS2O75934 225 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 LDHCP07864 332 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 GNA11P29992 359 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 ACADVLP49748 655 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 VSX2P58304 361 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 PRR3P79522 188 aaKnown RBP-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 LIPEQ05469 1076 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 SCARB2Q14108 478 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 TPRXLQ17RH7 258 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 Q6ZQT7 251 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 C11orf72Q8NBR9 251 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 OR51F2Q8NH61 342 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 OR10G6Q8NH81 332 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 CXorf40BQ96DE9 158 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 B9D2Q9BPU9 175 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 TIMM21Q9BVV7 248 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 PLEKHF2Q9H8W4 249 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 SMOXQ9NWM0 555 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 ATXN10Q9UBB4 475 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 RNF14Q9UBS8 474 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 CLN8Q9UBY8 286 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 SLC7A8Q9UHI5 535 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 KCNE3Q9Y6H6 103 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 HSPE1-MOB4S4R3N1 261 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 NUP205Q92621 2012 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 HMCN2Q8NDA2 5059 aa-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 UBR5O95071 2799 aaPredicted RBP-1.25□□□□□ -2.61
SNORA40-201ENST00000388090 BTN3A3O00478 584 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 PRKAB2O43741 272 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 DIRAS1O95057 198 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 GOSR1O95249 250 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 C1QCP02747 245 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 ARG1P05089 322 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 HMOX1P09601 288 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 YAP1P46937 504 aaKnown RBP-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 RND2P52198 227 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 TGM3Q08188 693 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 MERTKQ12866 999 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 LRRC8BQ6P9F7 803 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 GRINAQ7Z429 371 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 GHSRQ92847 366 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 SERPINB12Q96P63 405 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 SH3GL1Q99961 368 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 TMEM243Q9BU79 118 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 SLC19A3Q9BZV2 496 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 TMEM27Q9HBJ8 222 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 ACOT9Q9Y305 439 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 CAB39Q9Y376 341 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 ICOSQ9Y6W8 199 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 UBE4BO95155 1302 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 RTTNQ86VV8 2226 aa-1.26□□□□□ -2.61
SNORA40-201ENST00000388090 IGKV1-27A0A075B6S5 117 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 CENPBD1B2RD01 187 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 FNDC10F2Z333 226 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 MED7O43513 233 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 RAMP3O60896 148 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 OR7A10O76100 309 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 MAS1P04201 325 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 HSPD1P10809 573 aaKnown RBP-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 ETS2P15036 469 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 RPL13AP40429 203 aaKnown RBP-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 HOXC5Q00444 222 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 QPRTQ15274 297 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 ZNF829Q3KNS6 432 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 ZNF791Q3KP31 576 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 VN1R4Q7Z5H5 301 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 CCDC50Q8IVM0 306 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 SLC25A29Q8N8R3 303 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 OR5C1Q8NGR4 320 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 PTP4A1Q93096 173 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 SNX21Q969T3 373 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 NSMCE2Q96MF7 247 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 PEBP4Q96S96 227 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 MRPL13Q9BYD1 178 aaKnown RBP-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 PCSK1NQ9UHG2 260 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 MEMO1Q9Y316 297 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 NPTNQ9Y639 398 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 RTEL1-TNFRSF6BF6WH68 1400 aa-1.27□□□□□ -2.61
SNORA40-201ENST00000388090 TNRC6AQ8NDV7 1962 aaKnown RBP-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 IGHV1-69DA0A0B4J2H0 117 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 IGLL5B9A064 214 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 TAAR5O14804 337 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 CLDN3O15551 220 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 FCMRO60667 390 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 VPS26AO75436 327 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 RDH16O75452 317 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 PABPC4LP0CB38 370 aaKnown RBP-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 ERGP11308 486 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 SFNP31947 248 aa-1.28□□□□□ -2.61
SNORA40-201ENST00000388090 RBM34P42696 430 aaKnown RBP-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms