RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 NHLRC1Q6VVB1 395 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 Q6ZTK2 550 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 CHMP1BQ7LBR1 199 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 GALNT11Q8NCW6 608 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 CPNE4Q96A23 557 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 ZNF775Q96BV0 537 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 DERL3Q96Q80 235 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 ALG12Q9BV10 488 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 RDH8Q9NYR8 311 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 GNG8Q9UK08 70 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 TP53TG5Q9Y2B4 290 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SLC22A23A1A5C7 686 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 A6NIZ1 184 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SLC16A7O60669 478 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 VAMP5O95183 116 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 ACTL6AO96019 429 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 TFP02787 698 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 HRGP04196 525 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 C4BPBP20851 252 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 EDNRAP25101 427 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 PTGS2P35354 604 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 NAA10P41227 235 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 CENPAP49450 140 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 CLDN17P56750 224 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 RAP1BP61224 184 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 RAP1AP62834 184 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 HES5Q5TA89 166 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 METTL11BQ5VVY1 283 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 CARD17Q5XLA6 110 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 PLXDC2Q6UX71 529 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 UNQ6494/PRO21346Q6UXR6 183 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SLC51BQ86UW2 128 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 EXD3Q8N9H8 876 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 RBPMSQ93062 196 aaKnown RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 FOXN4Q96NZ1 517 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 TAAR6Q96RI8 345 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SPRR3Q9UBC9 169 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 GTF3C1Q12789 2109 aa11□□□□□ -0.65
CIITA-202ENST00000381835 LOC102725191A0A1B0GVB3 256 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF879B4DU55 563 aa11□□□□□ -0.65
CIITA-202ENST00000381835 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 GLCEO94923 617 aa11□□□□□ -0.65
CIITA-202ENST00000381835 GPANK1O95872 356 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ALDOBP05062 364 aa11□□□□□ -0.65
CIITA-202ENST00000381835 OR2T7P0C7T2 308 aa11□□□□□ -0.65
CIITA-202ENST00000381835 CTLA4P16410 223 aa11□□□□□ -0.65
CIITA-202ENST00000381835 AP3S2P59780 193 aa11□□□□□ -0.65
CIITA-202ENST00000381835 RPS11P62280 158 aaKnown RBP eCLIP11□□□□□ -0.65
CIITA-202ENST00000381835 FMODQ06828 376 aa11□□□□□ -0.65
CIITA-202ENST00000381835 RIPPLY1Q0D2K3 151 aa11□□□□□ -0.65
CIITA-202ENST00000381835 SLC17A1Q14916 467 aa11□□□□□ -0.65
CIITA-202ENST00000381835 OPCMLQ14982 345 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ETFDHQ16134 617 aa11□□□□□ -0.65
CIITA-202ENST00000381835 SLC35D3Q5M8T2 416 aa11□□□□□ -0.65
CIITA-202ENST00000381835 LINC01590Q5TEZ4 76 aa11□□□□□ -0.65
CIITA-202ENST00000381835 RPL22L1Q6P5R6 122 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 SYS1Q8N2H4 156 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF511Q8NB15 262 aa11□□□□□ -0.65
CIITA-202ENST00000381835 OR9K2Q8NGE7 335 aa11□□□□□ -0.65
CIITA-202ENST00000381835 OR2T27Q8NH04 317 aa11□□□□□ -0.65
CIITA-202ENST00000381835 KCNK17Q96T54 332 aa11□□□□□ -0.65
CIITA-202ENST00000381835 CNN2Q99439 309 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 PDCD1LG2Q9BQ51 273 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
CIITA-202ENST00000381835 VSX1Q9NZR4 365 aaPredicted RBP11□□□□□ -0.65
CIITA-202ENST00000381835 KLHL9Q9P2J3 617 aa11□□□□□ -0.65
CIITA-202ENST00000381835 MGAT4CQ9UBM8 478 aa11□□□□□ -0.65
CIITA-202ENST00000381835 NAP1L6A6NFF2 107 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF726A6NNF4 738 aa11□□□□□ -0.65
CIITA-202ENST00000381835 GABARAPH6UMI1 98 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ARPC1BO15143 372 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 ZNHIT1O43257 154 aa11□□□□□ -0.65
CIITA-202ENST00000381835 SRMP19623 302 aa11□□□□□ -0.65
CIITA-202ENST00000381835 PLEKHN1Q494U1 663 aaPredicted RBP11□□□□□ -0.65
CIITA-202ENST00000381835 TMEM255AQ5JRV8 349 aa11□□□□□ -0.65
CIITA-202ENST00000381835 FCRLAQ7L513 359 aa11□□□□□ -0.65
CIITA-202ENST00000381835 SERPINA12Q8IW75 414 aa11□□□□□ -0.65
CIITA-202ENST00000381835 SLC35F2Q8IXU6 374 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF433Q8N7K0 673 aaPredicted RBP11□□□□□ -0.65
CIITA-202ENST00000381835 UXS1Q8NBZ7 420 aa11□□□□□ -0.65
CIITA-202ENST00000381835 OR52I2Q8NH67 350 aa11□□□□□ -0.65
CIITA-202ENST00000381835 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
CIITA-202ENST00000381835 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 SLC25A44Q96H78 314 aaPredicted RBP11□□□□□ -0.65
CIITA-202ENST00000381835 ZNF385AQ96PM9 386 aaKnown RBP11□□□□□ -0.65
CIITA-202ENST00000381835 PLEKHA1Q9HB21 404 aa11□□□□□ -0.65
CIITA-202ENST00000381835 NOX4Q9NPH5 578 aa11□□□□□ -0.65
CIITA-202ENST00000381835 B9D1Q9UPM9 204 aa11□□□□□ -0.65
CIITA-202ENST00000381835 MOKQ9UQ07 419 aa11□□□□□ -0.65
CIITA-202ENST00000381835 A0A087WV48 116 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 A0A1B0GUH1 482 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 MED19A0JLT2 244 aaPredicted RBP10.99□□□□□ -0.65
CIITA-202ENST00000381835 TVP23AA6NH52 213 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 SELENOFO60613 162 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 KRT33AO76009 404 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 FAM87AP0C7U9 286 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 PSMB10P40306 273 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms