RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 K7ESM1 405 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 UPK3AO75631 287 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GIMD1P0DJR0 217 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 SLC2A1P11166 492 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 CRABP1P29762 137 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 RPL12P30050 165 aaKnown RBP6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GABRA3P34903 492 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GRK6P43250 576 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 TSFMP43897 325 aaKnown RBP6.56□□□□□ -1.36
TRIM6-202ENST00000380097 NUTF2P61970 127 aaKnown RBP6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GPM6BQ13491 265 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 TMEM128Q5BJH2 165 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GGNBP1Q5YKI7 109 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 SPNS3Q6ZMD2 512 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 GALNTL5Q7Z4T8 443 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 KDM8Q8N371 416 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 RAB24Q969Q5 203 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 SLC5A7Q9GZV3 580 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 FBXO34Q9NWN3 711 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 PRR13Q9NZ81 148 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 DNAJB11Q9UBS4 358 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 TMEM14AQ9Y6G1 99 aa6.56□□□□□ -1.36
TRIM6-202ENST00000380097 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 IFITM10A6NMD0 228 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 RAB27BO00194 218 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 OR6A2O95222 327 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PTBP3O95758 552 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SCGB1D2O95969 90 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 TBC1D3HP0C7X1 549 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PI3P19957 117 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 GDI1P31150 447 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 TLX1P31314 330 aaPredicted RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 FCGR2CP31995 323 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SNCAP37840 140 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 DHPSP49366 369 aaPredicted RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 AFF3P51826 1226 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 HNRNPKP61978 463 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 RPS23P62266 143 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SPOCK1Q08629 439 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SSPNQ14714 243 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 C4orf17Q53FE4 359 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 GFI1BQ5VTD9 330 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 LCN10Q6JVE6 187 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 TMEM104Q8NE00 496 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 NUS1Q96E22 293 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SLC25A44Q96H78 314 aaPredicted RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 DCBLD2Q96PD2 775 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 OR2M4Q96R27 311 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 MTIF3Q9H2K0 278 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 NKX2-4Q9H2Z4 354 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 IL36AQ9UHA7 158 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF107Q9UII5 783 aaPredicted RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 KLHDC2Q9Y2U9 406 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 ENTPD2Q9Y5L3 495 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PLXNA3P51805 1871 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 TRBV5-7A0A0A0MS05 114 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 A0A0B4J2E0 115 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 A0A1B0GX12 115 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SNRPCP09234 159 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 CTSAP10619 480 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 HOXA6P31267 233 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 BCL6P41182 706 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 NPY4RP50391 375 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 CLDN6P56747 220 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 GABREP78334 506 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PRDX1Q06830 199 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PEG10Q86TG7 708 aaKnown RBP6.55□□□□□ -1.36
TRIM6-202ENST00000380097 ZNF595Q8IYB9 648 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 BHLHE23Q8NDY6 225 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 OR4K15Q8NH41 348 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 FAM46BQ96A09 425 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SCGB3A2Q96PL1 93 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 OR11A1Q9GZK7 315 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 SRMSQ9H3Y6 488 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PDE7BQ9NP56 450 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 RAB18Q9NP72 206 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 PRDM7Q9NQW5 492 aa6.55□□□□□ -1.36
TRIM6-202ENST00000380097 LINC01553A4QN01 128 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 LDLRAD4O15165 306 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TRGC2P03986 189 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GLO1Q04760 184 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ITPRIPL2Q3MIP1 535 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 MOGAT2Q3SYC2 334 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TRMT12Q53H54 448 aaKnown RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 TCEAL5Q5H9L2 206 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ULK3Q6PHR2 472 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SLC22A25Q6T423 547 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 OPN5Q6U736 354 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 Q6ZNB5 142 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 NRSN1Q8IZ57 195 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 PNLDC1Q8NA58 520 aaKnown RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 RCBTB1Q8NDN9 531 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
TRIM6-202ENST00000380097 LCN9Q8WX39 176 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 ELOVL3Q9HB03 270 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 SLC2A8Q9NY64 477 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 FBXL17Q9UF56 701 aa6.54□□□□□ -1.36
TRIM6-202ENST00000380097 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms