RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 OTOGLQ3ZCN5 2332 aa13.01□□□□□ -0.33
RAB3IP-203ENST00000378809 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 CDRT15L2A8MXV6 281 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 KLRC4-KLRK1H3BQV0 150 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 NME2P1O60361 137 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 CYTIPO60759 359 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 B4GALT1P15291 398 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 CD46P15529 392 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ABOP16442 354 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 NME2P22392 152 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ANOS1P23352 680 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 MRPS34P82930 218 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 DYRK1AQ13627 763 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ELFN2Q5R3F8 820 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ADGRE4PQ86SQ3 457 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 NAA40Q86UY6 237 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 MEIOBQ8N635 442 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 OR52N4Q8NGI2 321 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 SLC25A28Q96A46 364 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 FBXO17Q96EF6 278 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 C7orf50Q9BRJ6 194 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 TMEM138Q9NPI0 162 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ASPMQ8IZT6 3477 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 EP300Q09472 2414 aaPredicted RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF318Q5VUA4 2279 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 IGHV3-9P01782 118 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 TCRBP04435 133 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 SDHBP21912 280 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 RRADP55042 308 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 PPIAP62937 165 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 FAM27BQ5VT28 67 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 OR10K2Q6IF99 312 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF813Q6ZN06 617 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF627Q7L945 461 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 PRSS33Q8NF86 280 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 OR4D6Q8NGJ1 314 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 PRRG4Q9BZD6 226 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 MCUBQ9NWR8 336 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 POU2F3Q9UKI9 436 aa13□□□□□ -0.33
RAB3IP-203ENST00000378809 NOSIPQ9Y314 301 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 PHF3Q92576 2039 aaKnown RBP13□□□□□ -0.33
RAB3IP-203ENST00000378809 NKX2-8O15522 239 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 SYNGR4O95473 234 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 ITGB2P05107 769 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 GSTT2BP0CG30 244 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 TRAPPC2P0DI81 140 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 TRAPPC2BP0DI82 140 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 HLA-DMAP28067 261 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 MNDAP41218 407 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 CLDN18P56856 261 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 CD83Q01151 205 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 CCDC92Q53HC0 331 aaPredicted RBP12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 DOK3Q7L591 496 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 SPTSSAQ969W0 71 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 TMEM38BQ9NVV0 291 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 NUBP2Q9Y5Y2 271 aa12.99□□□□□ -0.33
RAB3IP-203ENST00000378809 LOC390937A0A1W2PQ73 354 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 M0R135 149 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 DHFRP00374 187 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 DBHP09172 617 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 CEACAM16Q2WEN9 425 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 SFRP4Q6FHJ7 346 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 BIVMQ86UB2 503 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 SLC22A24Q8N4F4 322 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 ITFG2Q969R8 447 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF799Q96GE5 643 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 FOXB1Q99853 325 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 EXO5Q9H790 373 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 ASCL3Q9NQ33 180 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 COPZ2Q9P299 210 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 CIB4A0PJX0 185 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 C5orf63A6NC05 138 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 E9PLN8 166 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 SGCEO43556 437 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 MRPL33O75394 65 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 LIPCP11150 499 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 C3AR1Q16581 482 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 FAAP20Q6NZ36 180 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 TMPRSS7Q7RTY8 843 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 DACT3Q96B18 629 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 ST6GAL2Q96JF0 529 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 LDAHQ9H6V9 325 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 RANGRFQ9HD47 186 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 NKIRAS2Q9NYR9 191 aa12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 MCTS1Q9ULC4 181 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 RBMX2Q9Y388 322 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-203ENST00000378809 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 GMDSO60547 372 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms