RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SLC17A4Q9Y2C5 497 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 NSG2Q9Y328 171 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CCL27Q9Y4X3 112 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PCDHGA5Q9Y5G8 931 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ANKRD61A6NGH8 418 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CARD18P57730 90 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 HNF4GQ14541 408 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 MPPED2Q15777 294 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SHEQ5VZ18 495 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PRSS42Q7Z5A4 293 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 BPHLQ86WA6 291 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 PPP1R1CQ8WVI7 109 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PELI1Q96FA3 418 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ST6GAL2Q96JF0 529 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 RNF170Q96K19 258 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 NIT2Q9NQR4 276 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TUBG2Q9NRH3 451 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CLEC1BQ9P126 229 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 RNF150Q9ULK6 438 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CCDC163A0A0D9SF12 145 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PLSCR5A0PG75 271 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 BTBD17A6NE02 478 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 HRO43593 1189 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 GLSO94925 669 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZP3P21754 424 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TNFSF4P23510 183 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 FCGR2CP31995 323 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 THBS3P49746 956 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 NKAIN1Q4KMZ8 207 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PHLDA2Q53GA4 152 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SLC25A30Q5SVS4 291 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CST9LP1Q5W188 147 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 FAAP20Q6NZ36 180 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 DEFB123Q8N688 67 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 RELL2Q8NC24 303 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 OR51E1Q8TCB6 317 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 HSD17B8Q92506 261 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 EID2BQ96D98 161 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZC3HAV1LQ96H79 300 aaKnown RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 GUCD1Q96NT3 240 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 OR8B4Q96RC9 309 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 KCNJ15Q99712 375 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 UQCC2Q9BRT2 126 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 MTFP1Q9UDX5 166 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SLC23A1Q9UHI7 598 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 B9D1Q9UPM9 204 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SLC22A13Q9Y226 551 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 NOSIPQ9Y314 301 aaKnown RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 MYOFQ9NZM1 2061 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 A0A087WZY1 265 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 A0A0B4J2E0 115 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 A0A1B0GX12 115 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PYCARD-AS1I3L0S3 204 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TNFSF12O43508 249 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CBX7O95931 251 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SLC2A1P11166 492 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SLC6A1P30531 599 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CSNK1EP49674 416 aaKnown RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 PSMB3P49720 205 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CCR5P51681 352 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 UBE2MP61081 183 aaKnown RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 EXT1Q16394 746 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PNLIPRP3Q17RR3 467 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TFAP2EQ6VUC0 442 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TEX19Q8NA77 164 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 CLRN3Q8NCR9 226 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZNF845Q96IR2 970 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 MAP6Q96JE9 813 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 UBL7Q96S82 380 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 CDX2Q99626 313 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 PTDSS2Q9BVG9 487 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PRDM6Q9NQX0 595 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SERTAD4Q9NUC0 356 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ASH2LQ9UBL3 628 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PLEKHB1Q9UF11 243 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
VPS36-201ENST00000378060 KNTC1P50748 2209 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TPPPO94811 219 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 CLDN1O95832 211 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 CD37P11049 281 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 LTBRP36941 435 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 NDUFA6P56556 154 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 SNRPNP63162 240 aaKnown RBP7.59□□□□□ -1.19
VPS36-201ENST00000378060 PRTGQ2VWP7 1150 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 TMEM128Q5BJH2 165 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 NUDCD2Q8WVJ2 157 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 EMC6Q9BV81 110 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 OBP2BQ9NPH6 170 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 PCDHB10Q9UN67 800 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 KCNE3Q9Y6H6 103 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 PPM1DO15297 605 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 MOSPD3O75425 235 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 SUMO3P55854 103 aaPredicted RBP7.59□□□□□ -1.19
VPS36-201ENST00000378060 AKR1C1Q04828 323 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 BAMBIQ13145 260 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 TMEM31Q5JXX7 168 aa7.59□□□□□ -1.19
VPS36-201ENST00000378060 Q6ZRG5 221 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms