RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 OR2V2Q96R30 315 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 DDOQ99489 341 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 C1QTNF5Q9BXJ0 243 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 TEX12Q9BXU0 123 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 PNRC2Q9NPJ4 139 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 CMC2Q9NRP2 79 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 DNAJB9Q9UBS3 223 aa9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEFF2Q9UIK5 374 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-203ENST00000377808 MALRD1Q5VYJ5 2156 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 JMJD1CQ15652 2540 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PRR23D1E9PI22 279 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 DEAF1O75398 565 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 ATP5HO75947 161 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 MSMBP08118 114 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 ADH4P08319 380 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PRR23D2P0DMB1 279 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC2A1P11166 492 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 OSMP13725 252 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 SELEP16581 610 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PCMT1P22061 227 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 HSD11B1P28845 292 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 GSTT1P30711 240 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PRKXP51817 358 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 BLVRAP53004 296 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 RPS7P62081 194 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 C1orf146Q5VVC0 180 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PLBD1Q6P4A8 553 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 SHQ1Q6PI26 577 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PGAP1Q75T13 922 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF283Q8N7M2 679 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 OR8G5Q8NG78 346 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 OR10S1Q8NGN2 331 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 OR13G1Q8NGZ3 307 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM186Q96B77 213 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 INTS14Q96SY0 518 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 NMNAT2Q9BZQ4 307 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM106BQ9NUM4 274 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 HIF1ANQ9NWT6 349 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 DCAF16Q9NXF7 216 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PCDHB10Q9UN67 800 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
SMARCE1-203ENST00000377808 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 IQCF6A8MYZ5 107 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF878C9JN71 531 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 H0YL77 283 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 TBX1O43435 398 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 CIB2O75838 187 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 HLA-DPB1P04440 258 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 HMGN1P05114 100 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ANXA2P07355 339 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 SBK2P0C263 348 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ANXA8P13928 327 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ANPEPP15144 967 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 SRP9P49458 86 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 RAD23AP54725 363 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 LMO4P61968 165 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 GK2Q14410 553 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 SNAI3Q3KNW1 292 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 KRTAP27-1Q3LI81 207 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ACSM5Q6NUN0 579 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 FAHD2BQ6P2I3 314 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 OR2AE1Q8NHA4 323 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ZNF420Q8TAQ5 688 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 ZMYND19Q96E35 227 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 FAHD2AQ96GK7 314 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 MDFIQ99750 246 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 PAPOLBQ9NRJ5 636 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 DDX28Q9NUL7 540 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM100Q9NV29 134 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 DNAJC27Q9NZQ0 273 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 NPTNQ9Y639 398 aa9.79□□□□□ -0.84
SMARCE1-203ENST00000377808 RNF212BA8MTL3 300 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 F5H5P2 479 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 GLCEO94923 617 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 IGHV2-5P01817 119 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC15A1P46059 708 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 CX3CR1P49238 355 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 GFOD2Q3B7J2 385 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 GLYATL3Q5SZD4 288 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 TMEM236Q5W0B7 351 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 DRAM2Q6UX65 266 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 COLCA1Q6ZS62 124 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 PAPD5Q8NDF8 572 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 ST7LQ8TDW4 575 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 C1orf159Q96HA4 380 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 SLC30A2Q9BRI3 323 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 TVP23BQ9NYZ1 205 aa9.78□□□□□ -0.84
SMARCE1-203ENST00000377808 DNHD1Q96M86 4753 aa9.77□□□□□ -0.85
SMARCE1-203ENST00000377808 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.77□□□□□ -0.851e-10■■■■□ 23.8
SMARCE1-203ENST00000377808 TRAV20A0A0B4J274 112 aa9.77□□□□□ -0.85
SMARCE1-203ENST00000377808 MLNRO43193 412 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms