RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CCNKO75909 580 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 TBX6O95947 436 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 CLEC2LP0C7M8 214 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 PRKACAP17612 351 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 CA6P23280 308 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ARHGDIBP52566 201 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 GALEQ14376 348 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC17A1Q14916 467 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 XKRXQ6PP77 449 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 BHLHA15Q7RTS1 189 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 OR4K15Q8NH41 348 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF420Q8TAQ5 688 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 DVL3Q92997 716 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 APOBEC3DQ96AK3 386 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 IMMP1LQ96LU5 166 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 FAIMQ9NVQ4 179 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 NTMQ9P121 344 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 A0A0G2JMM0 328 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 A0A1W2PPB8 328 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 KIR3DP1A8MWS1 328 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 UPK3AO75631 287 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 AQP8O94778 261 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 UBL3O95164 117 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 SOX18P35713 384 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 NBL1P41271 181 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF136P52737 540 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 HES1Q14469 280 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 PPA1Q15181 289 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 TAF9Q16594 264 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 C1orf185Q5T7R7 199 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 FAHD1Q6P587 224 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 FAM214BQ7L5A3 538 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 C17orf82Q86X59 251 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 LSMEM1Q8N8F7 131 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF441Q8N8Z8 693 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 OR8D4Q8NGM9 314 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 CREB3L1Q96BA8 519 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 DMRTB1Q96MA1 342 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 WFDC6Q9BQY6 131 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC22A4Q9H015 551 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC7A10Q9NS82 523 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 TMEM100Q9NV29 134 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 KCNMB2Q9Y691 235 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 FANCMQ8IYD8 2048 aa7.53□□□□□ -1.2
CRNKL1-202ENST00000377340 SIRPB1O00241 398 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ARPC3O15145 178 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 HPGDSO60760 199 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 CYC1P08574 325 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 PTPN6P29350 595 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 PDCD1Q15116 288 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 FBXW9Q5XUX1 488 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 COMTD1Q86VU5 262 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ASB5Q8WWX0 329 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 FOXRED1Q96CU9 486 aaPredicted RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 RRNAD1Q96FB5 475 aaKnown RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 OPALINQ96PE5 141 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 TECTBQ96PL2 329 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 BARHL1Q9BZE3 327 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 B3GNT2Q9NY97 397 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 DEGS1O15121 323 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 FADS1O60427 444 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF254O75437 659 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 RPA2P15927 270 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 MVDP53602 400 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 MGAT2Q10469 447 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 FAM27D1Q5T7N8 215 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 SLC22A24Q8N4F4 322 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 OR56B2PQ8NGI1 322 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 HPS1Q92902 700 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 SLC26A1Q9H2B4 701 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 DOCK10Q96BY6 2186 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 C1QTNF9BB2RNN3 333 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ZNF732B4DXR9 585 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 PRSS44E7EML9 344 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 H7C2Y5 167 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 C1QTNF9P0C862 333 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 LIPAP38571 399 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 FUT5Q11128 374 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ARTNQ5T4W7 220 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ADAM5Q6NVV9 412 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 METAP1DQ6UB28 335 aaPredicted RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 MEX3BQ6ZN04 569 aaKnown RBP7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 GDPGP1Q6ZNW5 385 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 OR2G2Q8NGZ5 317 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 UBALD1Q8TB05 177 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 RAB3CQ96E17 227 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 ELMOD3Q96FG2 381 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 CACNG6Q9BXT2 260 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 PLK3Q9H4B4 646 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 NRIP3Q9NQ35 241 aa7.52□□□□□ -1.21
CRNKL1-202ENST00000377340 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms