RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ARSKQ6UWY0 536 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 ANKRD37Q7Z713 158 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 TRAPPC6BQ86SZ2 158 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 ST8SIA4Q92187 359 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 CST11Q9H112 138 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 FN3KRPQ9HA64 309 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 LMAN1LQ9HAT1 526 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 MED29Q9NX70 200 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 CACNA1CQ13936 2221 aa9.49□□□□□ -0.89
ABCF1-202ENST00000376545 CEACAM18A8MTB9 384 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 SSX5O60225 188 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 HLA-AP01891 365 aaKnown RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 SRFP11831 508 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 PPM1FP49593 454 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 POU3F1Q03052 451 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 TLE3Q04726 772 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 ZNF273Q14593 569 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 C16orf47Q6ZP98 133 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 C17orf107Q6ZR85 190 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 PRSS58Q8IYP2 241 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 C1orf147Q96MC9 270 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 PTGES2Q9H7Z7 377 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 SERINC1Q9NRX5 453 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 MYEF2Q9P2K5 600 aaKnown RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 FARSAQ9Y285 508 aaKnown RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 EFSO43281 561 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 PTGDSP41222 190 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 CXADRP78310 365 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 PPP1R1AQ13522 171 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 ZNF239Q16600 458 aaKnown RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 RNASE10Q5GAN6 216 aaKnown RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 THEM4Q5T1C6 240 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 C3orf33Q6P1S2 294 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 ACOT7LQ6ZUV0 252 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 GVQW1Q8N7I0 195 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 STT3BQ8TCJ2 826 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 SSC4DQ8WTU2 575 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 FGF21Q9NSA1 209 aa9.48□□□□□ -0.89
ABCF1-202ENST00000376545 RPH3AQ9Y2J0 694 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-202ENST00000376545 LAP3P28838 519 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CASRP41180 1078 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 FOXK1P85037 733 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 FOXF1Q12946 379 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SCGB2B2Q4G0G5 96 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 OR2W3Q7Z3T1 314 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 ZBTB44Q8NCP5 570 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 OR5D14Q8NGL3 314 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 OR10R2Q8NGX6 335 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 POC1BQ8TC44 478 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 PPP1R1CQ8WVI7 109 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CMBLQ96DG6 245 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 MRGPRX4Q96LA9 322 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 GAL3ST1Q99999 423 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 FOXQ1Q9C009 403 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 KCNK7Q9Y2U2 307 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 LHFPL6Q9Y693 200 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 VCANP13611 3396 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 TRBV6-7A0A0A0MS04 114 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 IGHV3-20A0A0C4DH32 117 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 OR2AT4A6NND4 320 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 ONECUT2O95948 504 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 PGA4P0DJD7 388 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 PGA3P0DJD8 388 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CCL1P22362 96 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 MSX1P28360 303 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 BTN1A1Q13410 526 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 KCNMB1Q16558 191 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 HIST3H3Q16695 136 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 HYAL4Q2M3T9 481 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SLC22A6Q4U2R8 563 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 HOGA1Q86XE5 327 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SLC25A45Q8N413 288 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 WDR77Q9BQA1 342 aaPredicted RBP9.47□□□□□ -0.89
ABCF1-202ENST00000376545 NOP16Q9Y3C1 178 aaKnown RBP9.47□□□□□ -0.89
ABCF1-202ENST00000376545 KNL1Q8NG31 2342 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CEP290O15078 2479 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 A0A0A6YYD4 124 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SULT2B1O00204 365 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SYT7O43581 403 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 STK17BO94768 372 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CHRM2P08172 466 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 RAB3AP20336 220 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 ATP1B3P54709 279 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 BIDP55957 195 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 PLPPR5Q32ZL2 321 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 LIN54Q6MZP7 749 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 CFAP77Q6ZQR2 320 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 RABEPKQ7Z6M1 372 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 RELL2Q8NC24 303 aaPredicted RBP9.47□□□□□ -0.89
ABCF1-202ENST00000376545 OR52H1Q8NGJ2 320 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
ABCF1-202ENST00000376545 IER2Q9BTL4 223 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 LPAR5Q9H1C0 372 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms