RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR56A1Q8NGH5 318 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR13C2Q8NGS9 318 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SFXN5Q8TD22 340 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 KCNE3Q9Y6H6 103 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CNOT1A5YKK6 2376 aaKnown RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 PRR19A6NJB7 356 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 LAMTOR5O43504 91 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 LDB3O75112 727 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZFPL1O95159 310 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CYB5AP00167 134 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SLC35G6P0C7Q6 338 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CRABP1P29762 137 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SOX2P48431 317 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 RAP1AP62834 184 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SLC25A42Q86VD7 318 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF610Q8N9Z0 462 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 PFN4Q8NHR9 129 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ST7LQ8TDW4 575 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 TMEM239Q8WW34 195 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 RERGQ96A58 199 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 PTGES2Q9H7Z7 377 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 UBQLN4Q9NRR5 601 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF223Q9UK11 482 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 WDFY3Q8IZQ1 3526 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 A0A1W2PR48 441 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR2C1O95371 312 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 HKR1P10072 659 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 VAMP1P23763 118 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 G0S2P27469 103 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SULT1A2P50226 295 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SKP1P63208 163 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 PPP1R1AQ13522 171 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SLC35D3Q5M8T2 416 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 FCRL6Q6DN72 434 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF574Q6ZN55 896 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZSCAN4Q8NAM6 433 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CASTOR1Q8WTX7 329 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 C16orf58Q96GQ5 468 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR7D2Q96RA2 312 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 LRIT1Q9P2V4 623 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 SIGLEC7Q9Y286 467 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 MAS1P04201 325 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 PAX1P15863 534 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 HIST1H1TP22492 207 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 TNFRSF9Q07011 255 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 RNASE10Q5GAN6 216 aaKnown RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF529Q6P280 563 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 ABHD17CQ6PCB6 329 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 RANBP3LQ86VV4 465 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 PPP1R3BQ86XI6 285 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 OR2L5Q8NG80 312 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 OR51D1Q8NGF3 324 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 C20orf141Q9NUB4 165 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 FARSAQ9Y285 508 aaKnown RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 FLVCR1Q9Y5Y0 555 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 A0A1W2PR77 199 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 IL2RAP01589 272 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF84P51523 738 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 FOXL2P58012 376 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 ADAM8P78325 824 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 HSD11B2P80365 405 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 DUSP2Q05923 314 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 C14orf28Q4W4Y0 310 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 CD163Q86VB7 1156 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 OR51A7Q8NH64 312 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 SLC22A18Q96BI1 424 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 BPIFA2Q96DR5 249 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 RRNAD1Q96FB5 475 aaKnown RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 NMES1Q9C002 83 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 RAB33BQ9H082 229 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 SLCO5A1Q9H2Y9 848 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 MRPS33Q9Y291 106 aaKnown RBP10.9□□□□□ -0.66
C9orf3-203ENST00000375315 TMED3Q9Y3Q3 217 aa10.9□□□□□ -0.66
C9orf3-203ENST00000375315 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 SYNDIG1LA6NDD5 238 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR5H15A6NDH6 313 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR5H1A6NKK0 313 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 AIFM1O95831 613 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 TSPAN15O95858 294 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 IGLV3-19P01714 112 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CX3CR1P49238 355 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 EFNB2P52799 333 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 HNRNPKP61978 463 aaKnown RBP eCLIP10.89□□□□□ -0.676e-13■■■□□ 15
C9orf3-203ENST00000375315 NKX6-1P78426 367 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 PPA1Q15181 289 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 SPNS3Q6ZMD2 512 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 Q6ZRG5 221 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 GKN2Q86XP6 184 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 COMMD1Q8N668 190 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR9A4Q8NGU2 314 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 RPS4Y2Q8TD47 263 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ARSGQ96EG1 525 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 PRSS27Q9BQR3 290 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 RNF126Q9BV68 326 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms