RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FGF7P21781 194 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 THBS4P35443 961 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 KIR3DL2P43630 455 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF616Q08AN1 781 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ELOBQ15370 118 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ZIC1Q15915 447 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 SLC22A6Q4U2R8 563 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 TMEM128Q5BJH2 165 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 DCST2Q5T1A1 773 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 AKR1C8PQ5T2L2 129 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ASPHD2Q6ICH7 369 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 LEG1Q6P5S2 330 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 SEMA6DQ8NFY4 1073 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 THRSPQ92748 146 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 OR10C1Q96KK4 312 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 LINC00615Q96LM1 132 aaPredicted RBP11.57□□□□□ -0.56
PRPF4-201ENST00000374198 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CCDC187A0A096LP49 1063 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 SMCO3A2RU48 225 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CD37P11049 281 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CHATP28329 748 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 PPA1Q15181 289 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ALG10BQ5I7T1 473 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 OR2T2Q6IF00 324 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 MED25Q71SY5 747 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ADGRE4PQ86SQ3 457 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CMTM8Q8IZV2 173 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF664Q8N3J9 261 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 OR2L5Q8NG80 312 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 AQP3Q92482 292 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 DCBLD2Q96PD2 775 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 TSSK2Q96PF2 358 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 SLC26A1Q9H2B4 701 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 FBXL21Q9UKT6 434 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 KCNK6Q9Y257 313 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 FBXO7Q9Y3I1 522 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 MMACHCQ9Y4U1 282 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 TCF20Q9UGU0 1960 aaKnown RBP11.57□□□□□ -0.56
PRPF4-201ENST00000374198 C9J4A7 227 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SYT7O43581 403 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 RAMP1O60894 148 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 TRGC2P03986 189 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 IFNA6P05013 189 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SPARCP09486 303 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 C6P13671 934 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 PPM1AP35813 382 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SLC11A1P49279 550 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 DHPSP49366 369 aaPredicted RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 S100A10P60903 97 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 POM121L1PQ3SYA9 428 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 GXYLT1Q4G148 440 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 GGNBP1Q5YKI7 109 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 VN1R2Q8NFZ6 395 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 OR9A4Q8NGU2 314 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SPPL3Q8TCT6 385 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 C4orf45Q96LM5 186 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 C2orf50Q96LR7 162 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 KXD1Q9BQD3 176 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 NUDT9Q9BW91 350 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 LMAN2LQ9H0V9 348 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 LAMP5Q9UJQ1 280 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 LSM7Q9UK45 103 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 MRPS18BQ9Y676 258 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 IGKV1-8A0A0C4DH67 115 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 K7ESM1 405 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 LDLRAD4O15165 306 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 QDPRP09417 244 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 FCARP24071 287 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 BCL6P41182 706 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 CDKN2AP42771 156 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 JOSD1Q15040 202 aaPredicted RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SLC9A3R2Q15599 337 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 WDR38Q5JTN6 314 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SOHLH1Q5JUK2 328 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 POC1AQ8NBT0 407 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 OR13D1Q8NGV5 346 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 JSRP1Q96MG2 331 aaPredicted RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 MENTQ9BUN1 341 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 PBDC1Q9BVG4 233 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 DDA1Q9BW61 102 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
PRPF4-201ENST00000374198 FBXL17Q9UF56 701 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 HS3ST3B1Q9Y662 390 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SLCO1B1Q9Y6L6 691 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 A0A087WV62 115 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 GMFGO60234 142 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 SFT2D2O95562 160 aa11.56□□□□□ -0.56
PRPF4-201ENST00000374198 DANCRP0C864 163 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms