RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 DBX1A6NMT0 343 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 TMEM150CB9EJG8 249 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 AHSA1O95433 338 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 THEGLP0DJG4 465 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 CRABP1P29762 137 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 EFNA3P52797 238 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 QRFPP83859 136 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 AIMP2Q13155 320 aaKnown RBP14.61□□□□□ -0.07
SDC4-201ENST00000372733 EBPQ15125 230 aaKnown RBP14.61□□□□□ -0.07
SDC4-201ENST00000372733 TMEM244Q5VVB8 128 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 BAP18Q8IXM2 172 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 SLC30A7Q8NEW0 376 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 NICN1Q9BSH3 213 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 SLC5A6Q9Y289 635 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 HS3ST3A1Q9Y663 406 aa14.61□□□□□ -0.07
SDC4-201ENST00000372733 SPTY2D1-AS1A0A0U1RR47 76 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 A8MVM7 634 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 ALG1L2C9J202 215 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 IGHMP01871 453 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 CAPZBP47756 277 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 FAHD2BQ6P2I3 314 aaPredicted RBP14.6□□□□□ -0.07
SDC4-201ENST00000372733 OR13C9Q8NGT0 318 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 GPR119Q8TDV5 335 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 FAHD2AQ96GK7 314 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 SPACA5Q96QH8 159 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 C12orf57Q99622 126 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 TMEM100Q9NV29 134 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 H2BFMP0C1H6 154 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 CD79AP11912 226 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 GABRG2P18507 467 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 HOXA1P49639 335 aaPredicted RBP14.6□□□□□ -0.07
SDC4-201ENST00000372733 RAB13P51153 203 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
SDC4-201ENST00000372733 DHRS7BQ6IAN0 325 aaPredicted RBP14.6□□□□□ -0.07
SDC4-201ENST00000372733 PRSS58Q8IYP2 241 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 SPAG16Q8N0X2 631 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 ZNF285Q96NJ3 590 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 TGM7Q96PF1 710 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 LRRC61Q9BV99 259 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 CARHSP1Q9Y2V2 147 aaKnown RBP14.6□□□□□ -0.07
SDC4-201ENST00000372733 FAM96BQ9Y3D0 163 aa14.6□□□□□ -0.07
SDC4-201ENST00000372733 SPTBN5Q9NRC6 3674 aaKnown RBP14.59□□□□□ -0.07
SDC4-201ENST00000372733 IGHV5-51A0A0C4DH38 117 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 PRAMEF26H0Y7S4 382 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 H0YIG0 161 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 TSPAN2O60636 221 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 ZNF217O75362 1048 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 ADAP1O75689 374 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 TTLL10Q6ZVT0 673 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
SDC4-201ENST00000372733 OR1M1Q8NGA1 313 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 CPNE2Q96FN4 548 aaPredicted RBP14.59□□□□□ -0.07
SDC4-201ENST00000372733 CNTNAP3BQ96NU0 1288 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 SPEGQ15772 3267 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 PI3P19957 117 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 SLC9A3R2Q15599 337 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 ZNF528Q3MIS6 628 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 HLA-DQA1Q5Y7H0 255 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 AWAT2Q6E213 333 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 COX15Q7KZN9 410 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 HOGA1Q86XE5 327 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.59□□□□□ -0.07
SDC4-201ENST00000372733 SLC22A24Q8N4F4 322 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 OR10R2Q8NGX6 335 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 OR4K15Q8NH41 348 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 RNF141Q8WVD5 230 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 WBP1LQ9NX94 342 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 ATXN7L1Q9ULK2 861 aaPredicted RBP14.59□□□□□ -0.07
SDC4-201ENST00000372733 EYSQ5T1H1 3165 aa14.59□□□□□ -0.07
SDC4-201ENST00000372733 MYO9BQ13459 2157 aa14.58□□□□□ -0.07
SDC4-201ENST00000372733 TRBV6-7A0A0A0MS04 114 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 OR2T1O43869 369 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 BPNT1O95861 308 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 TTRP02766 147 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 HSD11B1P28845 292 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 RFC3P40938 356 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 NPY4RP50391 375 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 MICBQ29980 383 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 MST1LQ2TV78 715 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 C10orf91Q5T1B1 145 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 TMEM200AQ86VY9 491 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 FAM206AQ9NX38 181 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 MED29Q9NX70 200 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 OR5AC2Q9NZP5 309 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 SEC16AO15027 2179 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 A0A0A6YYD4 124 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 ZNF705EA8MWA4 302 aaPredicted RBP14.58□□□□□ -0.08
SDC4-201ENST00000372733 SGCAQ16586 387 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 C2CD4CQ8TF44 421 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 ASB10Q8WXI3 467 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 TMEM230Q96A57 120 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 NMES1Q9C002 83 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 OR2S2Q9NQN1 319 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 MMP26Q9NRE1 261 aa14.58□□□□□ -0.08
SDC4-201ENST00000372733 DHCR7Q9UBM7 475 aaKnown RBP14.58□□□□□ -0.08
SDC4-201ENST00000372733 NPIPA5E9PKD4 350 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 SYT7O43581 403 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 FARS2O95363 451 aaKnown RBP14.57□□□□□ -0.08
SDC4-201ENST00000372733 FAM157CP0CG43 387 aa14.57□□□□□ -0.08
SDC4-201ENST00000372733 NFYBP25208 207 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms