RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GGNQ86UU5 652 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 SLC22A16Q86VW1 577 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 ZNF808Q8N4W9 903 aaPredicted RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 OR6N2Q8NGY6 317 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 ASB17Q8WXJ9 295 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 NPIPB3Q92617 1050 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 CPNE4Q96A23 557 aaPredicted RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 SF3B5Q9BWJ5 86 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 KCNN2Q9H2S1 579 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 RERGLQ9H628 205 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 COPS3Q9UNS2 423 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 GSTK1Q9Y2Q3 226 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 PNMA8CA0A1B0GUJ8 204 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 TRDV1A0A1B0GX56 115 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 NPIPA2E9PIF3 369 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 NPIPA3F8WFD2 350 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 KHDRBS3O75525 346 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 SULT1C4O75897 302 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 TACSTD2P09758 323 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 PGA4P0DJD7 388 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 PGA3P0DJD8 388 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 SOX6P35712 828 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 ENTPD1P49961 510 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 CARD18P57730 90 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 OR12D2P58182 307 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 RPL15P61313 204 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 RPS25P62851 125 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 RUNX1T1Q06455 604 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 TGIF2LYQ8IUE0 185 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 ZFP62Q8NB50 900 aaPredicted RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 FDCSPQ8NFU4 85 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 OR2V1Q8NHB1 315 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 OTOSQ8NHW6 89 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 PELI1Q96FA3 418 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 TXNDC15Q96J42 360 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 ADGRG7Q96K78 797 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 FOXC2Q99958 501 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 MRPL13Q9BYD1 178 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 HES7Q9BYE0 225 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 TXNL4BQ9NX01 149 aaKnown RBP7.7□□□□□ -1.18
TPM3-213ENST00000368545 KLHL9Q9P2J3 617 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 GNG8Q9UK08 70 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 A3GALT2U3KPV4 340 aa7.7□□□□□ -1.18
TPM3-213ENST00000368545 CNTRLQ7Z7A1 2325 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TVP23AA6NH52 213 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 ZNF726A6NNF4 738 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ZNF814B7Z6K7 855 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ADAM20O43506 726 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 CEACAM4O75871 244 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 AQP8O94778 261 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 KRT8P05787 483 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 PPIFP30405 207 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 PTGS2P35354 604 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TGFBR1P36897 503 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TGM4P49221 684 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TNFSF10P50591 281 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 CCL11P51671 97 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 HCCSP53701 268 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SLC17A1Q14916 467 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 CDK5R1Q15078 307 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TP53I3Q53FA7 332 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 FAM90A2PQ658T7 463 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 DMKNQ6E0U4 476 aaPredicted RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 SLC18B1Q6NT16 456 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 RPL22L1Q6P5R6 122 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 DPY19L4Q7Z388 723 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 FAM109AQ8N4B1 249 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 RFLNBQ8N5W9 214 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TMEM251Q8N6I4 163 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ZFP41Q8N8Y5 198 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SYT14Q8NB59 555 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SMIM19Q96E16 107 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 KCTD7Q96MP8 289 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 DACH2Q96NX9 599 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 NEU1Q99519 415 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SLX1AQ9BQ83 275 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TTYH2Q9BSA4 534 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ACKR4Q9NPB9 350 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 PAQR5Q9NXK6 330 aaPredicted RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 METTL15A6NJ78 407 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 FAM166BA8MTA8 275 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SERPINA3P01011 423 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 IL1AP01583 271 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ZNF823P16415 610 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ALOX5APP20292 161 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 MAGEA5P43359 124 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 CLDN20P56880 219 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 PPIAP62937 165 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 SIRPAP78324 504 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ROR2Q01974 943 aaKnown RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 HIST3H3Q16695 136 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 TEX30Q5JUR7 227 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 ZNF684Q5T5D7 378 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 KCTD18Q6PI47 426 aaPredicted RBP7.69□□□□□ -1.18
TPM3-213ENST00000368545 CREB3L2Q70SY1 520 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 MS4A15Q8N5U1 240 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 SLC26A10Q8NG04 563 aa7.69□□□□□ -1.18
TPM3-213ENST00000368545 OR9K2Q8NGE7 335 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms