RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 ZNF404Q494X3 552 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 ZNF620Q6ZNG0 422 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 PGAP1Q75T13 922 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 MRPL21Q7Z2W9 205 aaKnown RBP12.44□□□□□ -0.42
CTSD-202ENST00000367196 CPLX4Q7Z7G2 160 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 MOGAT3Q86VF5 341 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 KLBQ86Z14 1044 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 LINC00346Q8IVM7 164 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 OR52E2Q8NGJ4 325 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
CTSD-202ENST00000367196 SLC25A28Q96A46 364 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 IL1RAPQ9NPH3 570 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 DOCK11Q5JSL3 2073 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 IGHV2-70DA0A0C4DH43 119 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 A0A1B0GWJ7 208 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 F5H5P2 479 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 ARPC2O15144 300 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 MLNRO43193 412 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 SNX3O60493 162 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 LCATP04180 440 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 HKR1P10072 659 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 CD200P41217 278 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 PAX8Q06710 450 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 BAMBIQ13145 260 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 GK2Q14410 553 aaPredicted RBP12.43□□□□□ -0.42
CTSD-202ENST00000367196 CFAP77Q6ZQR2 320 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 PARP8Q8N3A8 854 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 Q8TCH9 128 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 WDR76Q9H967 626 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 TRIM36Q9NQ86 728 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 CLN8Q9UBY8 286 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 ZNF69Q9UC07 566 aa12.43□□□□□ -0.42
CTSD-202ENST00000367196 DNAJC9-AS1A6NH13 148 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 CLDN34H7C241 214 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 M0R135 149 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 PHYHO14832 338 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 GGT2P36268 569 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 GSSP48637 474 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 PITPNBP48739 271 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTSD-202ENST00000367196 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 HNRNPA0Q13151 305 aaKnown RBP12.42□□□□□ -0.42
CTSD-202ENST00000367196 OR8G1Q15617 311 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 TUSC1Q2TAM9 212 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 KLF17Q5JT82 389 aaPredicted RBP12.42□□□□□ -0.42
CTSD-202ENST00000367196 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 DCDC5Q6ZRR9 648 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 C9orf139Q6ZV77 190 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 ZDHHC21Q8IVQ6 265 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 PROKR2Q8NFJ6 384 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 RAB40AQ8WXH6 277 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 SLCO4A1Q96BD0 722 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 TMEM246Q9BRR3 403 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 OPA3Q9H6K4 179 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 FN3KRPQ9HA64 309 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 KIF17Q9P2E2 1029 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 TAGLN3Q9UI15 199 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 CDH10Q9Y6N8 788 aa12.42□□□□□ -0.42
CTSD-202ENST00000367196 OR6C68A6NDL8 312 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 H0YL77 283 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 RNASE1P07998 156 aaKnown RBP12.41□□□□□ -0.42
CTSD-202ENST00000367196 NPY4RP50391 375 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 MNAT1P51948 309 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 MXRA7P84157 204 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 DRAM2Q6UX65 266 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 UPRTQ96BW1 309 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 CDRT15Q96T59 188 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 ZNF747Q9BV97 191 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 FN3KQ9H479 309 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
CTSD-202ENST00000367196 CD300AQ9UGN4 299 aa12.41□□□□□ -0.42
CTSD-202ENST00000367196 ENSAO43768 121 aaKnown RBP12.4□□□□□ -0.42
CTSD-202ENST00000367196 GMDSO60547 372 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 DCTN3O75935 186 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 ZNF205O95201 554 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 CD80P33681 288 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 BPIFB3P59826 476 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 IL13RA1P78552 427 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 PAX2Q02962 417 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
CTSD-202ENST00000367196 CLEC12AQ5QGZ9 265 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 PGBD2Q6P3X8 592 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 SPERTQ8NA61 448 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
CTSD-202ENST00000367196 COPS4Q9BT78 406 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 ADAT1Q9BUB4 502 aaKnown RBP12.4□□□□□ -0.42
CTSD-202ENST00000367196 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 MRPL22Q9NWU5 206 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms