RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 OR10R2Q8NGX6 335 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM174Q8WUU8 243 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 CMC2Q9NRP2 79 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 SOX18P35713 384 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 CGB2Q6NT52 195 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 OR4Q3Q8NH05 313 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 RYDENQ9NUL5 291 aaKnown RBP14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 UGT2A1Q9Y4X1 527 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 MT-CO3P00414 261 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 CBR1P16152 277 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 TCTN3Q6NUS6 607 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 PCED1AQ9H1Q7 454 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 CSAG2Q9Y5P2 127 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 DHHO43323 396 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 FAM53BQ14153 422 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 OR2M7Q8NG81 312 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM129A0AVI4 362 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 K7EQS6 105 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 PPIHO43447 177 aaKnown RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 S100A8P05109 93 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 CLEC2LP0C7M8 214 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 PTRH1Q86Y79 214 aaKnown RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 GRAMD2BQ96HH9 432 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 FBXL4Q9UKA2 621 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 C4BP0C0L5 1744 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 H7BYZ3 331 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 DIO1P49895 249 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 FUT6P51993 359 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 STUMQ69YW2 141 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 GATA6Q92908 595 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 SPACA9Q96E40 222 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 ZIC5Q96T25 663 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 C11orf54Q9H0W9 315 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 NARFLQ9H6Q4 476 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 AAMDCQ9H7C9 122 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 LILRA5A6NI73 299 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 GFERP55789 205 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM99Q8N816 258 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 NOXO1Q8NFA2 376 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 SCARB1Q8WTV0 552 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 PKMYT1Q99640 499 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 MED29Q9NX70 200 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 JTBO76095 146 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 GSG1Q2KHT4 349 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 HFEQ30201 348 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 PLA2G12AQ9BZM1 189 aa14.23□□□□□ -0.13
NUCKS1-201ENST00000367142 SOCS7O14512 581 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 LINC01565O15544 149 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 SIX6O95475 246 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 RAB1AP62820 205 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 BTNL3Q6UXE8 466 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 FAM122BQ7Z309 247 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 OSR2Q8N2R0 312 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC24A4Q8NFF2 622 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM30CPA0ZSE6 113 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 HPP00738 406 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 FOXF1Q12946 379 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CTU2Q2VPK5 515 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 TOR2AQ5JU69 321 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 PRSS45Q7RTY3 260 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 ZC3H12DA2A288 527 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 FCGR2CP31995 323 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CNN1P51911 297 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CD276Q5ZPR3 534 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC25A26Q70HW3 274 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 DEFB124Q8NES8 71 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CLEC2DQ9UHP7 191 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 PDGFBP01127 241 aaPredicted RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 EXOSC2Q13868 293 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM65Q6PI78 240 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 OR2Z1Q8NG97 314 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CCL4L1Q8NHW4 92 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 HCCSP53701 268 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 RNPS1Q15287 305 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 RPEQ96AT9 228 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 SERTM1A2A2V5 107 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 TCAPO15273 167 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 NME2P1O60361 137 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 LRFN3Q9BTN0 628 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 ADAT1Q9BUB4 502 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 NAA50Q9GZZ1 169 aaKnown RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 TUBB1Q9H4B7 451 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 POMT2Q9UKY4 750 aa14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 AMMECR1Q9Y4X0 333 aaPredicted RBP14.22□□□□□ -0.13
NUCKS1-201ENST00000367142 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 RBP4P02753 201 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 ENDOGQ14249 297 aaKnown RBP14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 RHOUQ7L0Q8 258 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC7A5P1Q8MH63 180 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 DTWD2Q8NBA8 298 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 GDF2Q9UK05 429 aaPredicted RBP14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 FAM221AA4D161 298 aa14.21□□□□□ -0.13
NUCKS1-201ENST00000367142 POLR2IP36954 125 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms