RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 PKP2Q99959 881 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
MRPL55-217ENST00000366746 TRIM15Q9C019 465 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 ANKRD19PQ9H560 264 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 UFSP2Q9NUQ7 469 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 ACOXLQ9NUZ1 547 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
MRPL55-217ENST00000366746 CENPVL3A0A0U1RRI6 287 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 HMGB1P1B2RPK0 211 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 F5H5K5 113 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 GSTA4O15217 222 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 CD200P41217 278 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 CDKN2AP42771 156 aaKnown RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 RAD23AP54725 363 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 ECH1Q13011 328 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 GK2Q14410 553 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 MPPED2Q15777 294 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 TAF9Q16594 264 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 MEP1BQ16820 701 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 DPY19L2P2Q6ZN68 376 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 PTCHD4Q6ZW05 846 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 PITX2Q99697 317 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 FN3KRPQ9HA64 309 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 RNF7Q9UBF6 113 aa13.87□□□□□ -0.19
MRPL55-217ENST00000366746 NOP16Q9Y3C1 178 aaKnown RBP13.87□□□□□ -0.19
MRPL55-217ENST00000366746 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 CXCR6O00574 342 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 LCATP04180 440 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 PRSS12P56730 875 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 COX10Q12887 443 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 OR8G1Q15617 311 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 OR8B8Q15620 311 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 RSPO1Q2MKA7 263 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-217ENST00000366746 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-217ENST00000366746 ASPHD2Q6ICH7 369 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 CBLL1Q75N03 491 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 BOLLQ8N9W6 283 aaKnown RBP13.86□□□□□ -0.19
MRPL55-217ENST00000366746 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SLCO4A1Q96BD0 722 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 HSH2DQ96JZ2 352 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SLC22A4Q9H015 551 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
MRPL55-217ENST00000366746 SAR1AQ9NR31 198 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 CMTM6Q9NX76 183 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 ARMCX1Q9P291 453 aa13.86□□□□□ -0.19
MRPL55-217ENST00000366746 IGHV1-69DA0A0B4J2H0 117 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 LGALS8O00214 317 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 ADAM20O43506 726 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 NDUFA2O43678 99 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 GPR137BO60478 399 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TXNDC12O95881 172 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 IGHV1-69P01742 117 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 ACSM4P0C7M7 580 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 MMP9P14780 707 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 MDH1P40925 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 MRPL21Q7Z2W9 205 aaKnown RBP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 ARPINQ7Z6K5 226 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 SCCPDHQ8NBX0 429 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 OR2AJ1Q8NGZ0 328 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 LHX4Q969G2 390 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 RSRC1Q96IZ7 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TBX15Q96SF7 602 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 ATF6BQ99941 703 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TCF7L1Q9HCS4 588 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TRIM36Q9NQ86 728 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 CTSZQ9UBR2 303 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
MRPL55-217ENST00000366746 ENPP4Q9Y6X5 453 aa13.85□□□□□ -0.19
MRPL55-217ENST00000366746 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 A0A1W2PRQ8 180 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 DCTN6O00399 190 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 CLPXO76031 633 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 SERPINA1P01009 418 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 IGHV4-59P01825 116 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
MRPL55-217ENST00000366746 CA6P23280 308 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 IER3P46695 156 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 LIPEQ05469 1076 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
MRPL55-217ENST00000366746 DGCR6Q14129 220 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 SLC36A3Q495N2 470 aa13.84□□□□□ -0.19
MRPL55-217ENST00000366746 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms