RNA–Protein interactions for RNA: ENST00000366734.5

MRPL55-208, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 990 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-208ENST00000366734 PKP2Q99959 881 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
MRPL55-208ENST00000366734 TRIM15Q9C019 465 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 ANKRD19PQ9H560 264 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 UFSP2Q9NUQ7 469 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 ACOXLQ9NUZ1 547 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
MRPL55-208ENST00000366734 CENPVL3A0A0U1RRI6 287 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 HMGB1P1B2RPK0 211 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 F5H5K5 113 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 GSTA4O15217 222 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 CD200P41217 278 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 CDKN2AP42771 156 aaKnown RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 RAD23AP54725 363 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 ECH1Q13011 328 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 GK2Q14410 553 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 MPPED2Q15777 294 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 TAF9Q16594 264 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 MEP1BQ16820 701 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 DPY19L2P2Q6ZN68 376 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 PTCHD4Q6ZW05 846 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 PITX2Q99697 317 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 FN3KRPQ9HA64 309 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 RNF7Q9UBF6 113 aa13.87□□□□□ -0.19
MRPL55-208ENST00000366734 NOP16Q9Y3C1 178 aaKnown RBP13.87□□□□□ -0.19
MRPL55-208ENST00000366734 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 CXCR6O00574 342 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 LCATP04180 440 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 PRSS12P56730 875 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 COX10Q12887 443 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 OR8G1Q15617 311 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 OR8B8Q15620 311 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 RSPO1Q2MKA7 263 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-208ENST00000366734 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-208ENST00000366734 ASPHD2Q6ICH7 369 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 CBLL1Q75N03 491 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 BOLLQ8N9W6 283 aaKnown RBP13.86□□□□□ -0.19
MRPL55-208ENST00000366734 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SLCO4A1Q96BD0 722 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 HSH2DQ96JZ2 352 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SLC22A4Q9H015 551 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
MRPL55-208ENST00000366734 SAR1AQ9NR31 198 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 CMTM6Q9NX76 183 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 ARMCX1Q9P291 453 aa13.86□□□□□ -0.19
MRPL55-208ENST00000366734 IGHV1-69DA0A0B4J2H0 117 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 LGALS8O00214 317 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 ADAM20O43506 726 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 NDUFA2O43678 99 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 GPR137BO60478 399 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TXNDC12O95881 172 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 IGHV1-69P01742 117 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 ACSM4P0C7M7 580 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 MMP9P14780 707 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 MDH1P40925 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 MRPL21Q7Z2W9 205 aaKnown RBP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 ARPINQ7Z6K5 226 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 SCCPDHQ8NBX0 429 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 OR2AJ1Q8NGZ0 328 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 LHX4Q969G2 390 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 RSRC1Q96IZ7 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TBX15Q96SF7 602 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 ATF6BQ99941 703 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TCF7L1Q9HCS4 588 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TRIM36Q9NQ86 728 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 CTSZQ9UBR2 303 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
MRPL55-208ENST00000366734 ENPP4Q9Y6X5 453 aa13.85□□□□□ -0.19
MRPL55-208ENST00000366734 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 A0A1W2PRQ8 180 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 DCTN6O00399 190 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 CLPXO76031 633 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 SERPINA1P01009 418 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 IGHV4-59P01825 116 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
MRPL55-208ENST00000366734 CA6P23280 308 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 IER3P46695 156 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 LIPEQ05469 1076 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
MRPL55-208ENST00000366734 DGCR6Q14129 220 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 SLC36A3Q495N2 470 aa13.84□□□□□ -0.19
MRPL55-208ENST00000366734 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms