RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MLXQ9UH92 298 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 TNRC6AQ8NDV7 1962 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NBASA2RRP1 2371 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 MPTX1A8MV57 137 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PIN1P1O15428 100 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 TRAF3IP2O43734 574 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NEURL1O76050 574 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ABHD16AO95870 558 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 IL1AP01583 271 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RAB40ALP0C0E4 278 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SPINK2P20155 84 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NTF4P34130 210 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NUP62P37198 522 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DSCR4P56555 118 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CLDN17P56750 224 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ACTA2P62736 377 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ACTG2P63267 376 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PSPHP78330 225 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ACSM1Q08AH1 577 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 P2RY14Q15391 338 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF79Q15937 498 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 EMC4Q5J8M3 183 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SPANXN2Q5MJ10 180 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PHYHD1Q5SRE7 291 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF684Q5T5D7 378 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DDI2Q5TDH0 399 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 MTFR2Q6P444 385 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 FAM131AQ6UXB0 335 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DCXRQ7Z4W1 244 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DPPA2Q7Z7J5 298 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CCDC190Q86UF4 302 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RAB43Q86YS6 212 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 UEVLDQ8IX04 471 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 GTPBP8Q8N3Z3 284 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 OTOSQ8NHW6 89 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ADAMTS17Q8TE56 1095 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ADAMTS14Q8WXS8 1223 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 FAM122AQ96E09 287 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SMIM19Q96E16 107 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF837Q96EG3 531 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DIRAS2Q96HU8 199 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF845Q96IR2 970 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 HYLS1Q96M11 299 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SLC30A2Q9BRI3 323 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NUDT16L1Q9BRJ7 211 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CENPMQ9NSP4 180 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ELF5Q9UKW6 265 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RASD1Q9Y272 281 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CMAHPQ9Y471 501 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PCDHGB6Q9Y5F9 930 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PEX16Q9Y5Y5 336 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 V9GYH0 126 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SPTA1P02549 2419 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 TLN1Q9Y490 2541 aaKnown RBP4.51□□□□□ -1.69
ATXN3-202ENST00000359366 ETV2O00321 342 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-202ENST00000359366 SULT1C2O00338 296 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 PHYHO14832 338 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 OGG1O15527 345 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 LMX1BO60663 402 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 WISP2O76076 250 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 IFNA2P01563 188 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 IFNA10P01566 189 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 IGHV3-9P01782 118 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 IGHEP01854 428 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 SERPINA5P05154 406 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 CYC1P08574 325 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 SLC2A1P11166 492 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF43P17038 809 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 APEX1P27695 318 aaKnown RBP4.51□□□□□ -1.69
ATXN3-202ENST00000359366 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-202ENST00000359366 KIR3DL2P43630 455 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 MMP16P51512 607 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 NOVA1P51513 510 aaKnown RBP4.51□□□□□ -1.69
ATXN3-202ENST00000359366 CLDN15P56746 228 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 CLRN1P58418 232 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 B3GALT5-AS1P59052 145 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 OR1C1Q15619 314 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 HYAL4Q2M3T9 481 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 WDR38Q5JTN6 314 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 CNIH2Q6PI25 160 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 LRFN4Q6PJG9 635 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 NHLRC1Q6VVB1 395 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 TMPPEQ6ZT21 453 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 PGAP1Q75T13 922 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 FAM220AQ7Z4H9 259 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 COMMD7Q86VX2 200 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 IZUMO1Q8IYV9 350 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 C11orf40Q8WZ69 217 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 SFXN2Q96NB2 322 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 DERL3Q96Q80 235 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 GFI1Q99684 422 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 TTYH2Q9BSA4 534 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 ABHD6Q9BV23 337 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 CCDC32Q9BV29 185 aa4.51□□□□□ -1.69
ATXN3-202ENST00000359366 KCNK15Q9H427 330 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms