RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ANKRD19PQ9H560 264 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ZNF556Q9HAH1 456 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 MED11Q9P086 117 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 LHFPL6Q9Y693 200 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 AP1M2Q9Y6Q5 423 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 IGHV5-10-1A0A0J9YXX1 117 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 NUDT21O43809 227 aaKnown RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 LDOC1O95751 146 aaPredicted RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 CLDN1O95832 211 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 IFNA8P32881 189 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ACY1Q03154 408 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 KLHL26Q53HC5 615 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 WDR74Q6RFH5 385 aaPredicted RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 GALNTL5Q7Z4T8 443 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 NUDT13Q86X67 352 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 OR10G3Q8NGC4 313 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 RAB7BQ96AH8 199 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 TRIM62Q9BVG3 475 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 FNDC11Q9BVV2 318 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 CHRNA10Q9GZZ6 450 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 KIR3DX1Q9H7L2 352 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 CALHM2Q9HA72 323 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 DEPPQ9NTK1 212 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 CFL2Q9Y281 166 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 TRBV20OR9-2A0A075B6H5 130 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 IGLV1-36A0A0B4J1U3 117 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 MFSD2BA6NFX1 497 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 B4DGG1 531 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ASNA1O43681 348 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 IL1AP01583 271 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 TTRP02766 147 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 SELLP14151 372 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 MMP9P14780 707 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 MUC1P15941 1255 aaPredicted RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 PPP3CBP16298 524 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ATF4P18848 351 aaPredicted RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 RORAP35398 523 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 CD96P40200 585 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ZNF613Q6PF04 617 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 COX15Q7KZN9 410 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 DND1Q8IYX4 353 aaKnown RBP4.87□□□□□ -1.63
CD47-201ENST00000355354 CA13Q8N1Q1 262 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 FAM109AQ8N4B1 249 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 ZNF417Q8TAU3 575 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 SLC22A8Q8TCC7 542 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 C5orf30Q96GV9 206 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 FAT2Q9NYQ8 4349 aa4.87□□□□□ -1.63
CD47-201ENST00000355354 TRAV18A0A075B6X5 111 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 IGKV1D-13A0A0B4J2D9 117 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ZNF432O94892 652 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 IGKV1-13P0DP09 117 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 HK1P19367 917 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 IFNGR2P38484 337 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 HERPUD1Q15011 391 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 RASSF6Q6ZTQ3 369 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 TMPRSS11FQ6ZWK6 438 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 C6orf201Q7Z4U5 140 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 GATAD1Q8WUU5 269 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 AGMATQ9BSE5 352 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 PNRC2Q9NPJ4 139 aaKnown RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 C14orf105Q9NVL8 296 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 SLC2A8Q9NY64 477 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 FOXJ3Q9UPW0 622 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 OR5K3A6NET4 321 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 F2Z2F3 143 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 SPP1P10451 314 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 DNASE1P24855 282 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 GMFBP60983 142 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ERVS71-1P61550 626 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ZNF45Q02386 682 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 IL15RAQ13261 267 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 FIGLAQ6QHK4 219 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 DHRS11Q6UWP2 260 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 TFAP2EQ6VUC0 442 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 RNF165Q6ZSG1 346 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 RAB43Q86YS6 212 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 TMEM156Q8N614 296 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 OR1L3Q8NH93 324 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 KCTD7Q96MP8 289 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ZNF285Q96NJ3 590 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 SMIM3Q9BZL3 60 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 WDR26Q9H7D7 661 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 G6PC2Q9NQR9 355 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 FAM212BQ9NTI7 297 aaPredicted RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 FARSAQ9Y285 508 aaKnown RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 EXOGQ9Y2C4 368 aaKnown RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 RNF215Q9Y6U7 377 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ISPDA4D126 451 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 B4E171 279 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 LDLRAD4O15165 306 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 SLC16A7O60669 478 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 ERCC1P07992 297 aaPredicted RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 NPPCP23582 126 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 PTX3P26022 381 aaPredicted RBP4.86□□□□□ -1.63
CD47-201ENST00000355354 TACR3P29371 465 aa4.86□□□□□ -1.63
CD47-201ENST00000355354 TSPAN7P41732 249 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms