RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SVBPQ8N300 66 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 C9orf62Q8N4C0 152 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 ACBD6Q9BR61 282 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 MARVELD1Q9BSK0 173 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 PITHD1Q9GZP4 211 aaPredicted RBP5.35□□□□□ -1.55
RFC1-201ENST00000349703 ARL6Q9H0F7 186 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 TMEM74BQ9NUR3 256 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 MUTYHQ9UIF7 546 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 SHANK3Q9BYB0 1731 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 TAF1LQ8IZX4 1826 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 TRDV1A0A1B0GX56 115 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A18PA6NE21 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A16PA6NEW6 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A9PA6NNJ1 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A5PA8MXJ8 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 SMLR1H3BR10 107 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 SIRPB1O00241 398 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 HMGB3O15347 200 aaKnown RBP5.35□□□□□ -1.55
RFC1-201ENST00000349703 IFNA4P05014 189 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 ADRB1P08588 477 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A15PP0C7V4 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 FAM90A14PP0C7W9 464 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 F3P13726 295 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 SELPP16109 830 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 EPCAMP16422 314 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 RAB3BP20337 219 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 CTGFP29279 349 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 CTBP2P56545 445 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 TAS2R41P59536 307 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 LTB4RQ15722 352 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 ZNF260Q3ZCT1 412 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 UQCC3Q6UW78 93 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 RNF165Q6ZSG1 346 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 CLDN19Q8N6F1 224 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 BCORP1Q8N888 145 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 DTD1Q8TEA8 209 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 C7orf34Q96L11 122 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 OPALINQ96PE5 141 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 RNF167Q9H6Y7 350 aa5.35□□□□□ -1.55
RFC1-201ENST00000349703 NMNAT1Q9HAN9 279 aaPredicted RBP5.35□□□□□ -1.55
RFC1-201ENST00000349703 MRPS18AQ9NVS2 196 aaKnown RBP5.35□□□□□ -1.55
RFC1-201ENST00000349703 RBM7Q9Y580 266 aaKnown RBP5.35□□□□□ -1.55
RFC1-201ENST00000349703 TAF1P21675 1872 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 PPIAL4EA0A075B759 164 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 NME2P1O60361 137 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 LMX1BO60663 402 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 RCBTB2O95199 551 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 SLC16A8O95907 504 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 PDYNP01213 254 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 OPN1SWP03999 348 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 PPIAL4FP0DN26 164 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 GATA3P23771 443 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 RNASE12Q5GAN4 147 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 DCST2Q5T1A1 773 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 TANGO2Q6ICL3 276 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 FRMPD2BQ6IN97 320 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ACOT7LQ6ZUV0 252 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 CALHM1Q8IU99 346 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 GID4Q8IVV7 300 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZNF679Q8IYX0 411 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZNF439Q8NDP4 499 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 TTLQ8NG68 377 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 OR2L5Q8NG80 312 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 OR5D13Q8NGL4 314 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 OR1N1Q8NGS0 311 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 PPTC7Q8NI37 304 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 SETD7Q8WTS6 366 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZBED6CLQ96FA7 236 aaPredicted RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 C14orf105Q9NVL8 296 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 IL36AQ9UHA7 158 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZNF346Q9UL40 294 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 SH2B3Q9UQQ2 575 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 B3GAT3O94766 335 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 TIAF1O95411 115 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 TBX6O95947 436 aaPredicted RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 S100A8P05109 93 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 FABP1P07148 127 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZNF286BP0CG31 522 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 MMP11P24347 488 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 MAT1AQ00266 395 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 RGNQ15493 299 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 GNPDA2Q8TDQ7 276 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 FOXRED1Q96CU9 486 aaPredicted RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 C12orf57Q99622 126 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 PRRX2Q99811 253 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 RDH14Q9HBH5 336 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 GPR173Q9NS66 373 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 CLEC4EQ9ULY5 219 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 LOC105371242A0A075B767 164 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 SLC31A1O15431 190 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 ANGPTL7O43827 346 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 SSTR2P30874 369 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 MRPS10P82664 201 aaKnown RBP5.34□□□□□ -1.55
RFC1-201ENST00000349703 HSF1Q00613 529 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 MTAPQ13126 283 aa5.34□□□□□ -1.55
RFC1-201ENST00000349703 SLC9A3R2Q15599 337 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms