RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 WIPF3A6NGB9 483 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 CECR9P0C854 216 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 CD53P19397 219 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 TTKP33981 857 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 SLC6A9P48067 706 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 ELMOD2Q8IZ81 293 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 GHSRQ92847 366 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 PDCD1LG2Q9BQ51 273 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 MYO18BQ8IUG5 2567 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 HCFC1P51610 2035 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 CD36P16671 472 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 SLC3A1Q07837 685 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 TBC1D28Q2M2D7 210 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 BCL2L15Q5TBC7 163 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF544Q6NX49 715 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 FAM57BQ71RH2 274 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 C1QTNF5Q9BXJ0 243 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 GTF2A1LQ9UNN4 478 aa23.45■■□□□ 1.34
SSBP4-202ENST00000348495 C5orf63A6NC05 138 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 TMEM212A6NML5 194 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 ICMTO60725 284 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 TTRP02766 147 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 ANXA2P07355 339 aaKnown RBP23.44■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF83P51522 516 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 OR8B12Q8NGG6 310 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 OR1J2Q8NGS2 313 aa23.44■■□□□ 1.34
SSBP4-202ENST00000348495 NPDC1Q9NQX5 325 aaPredicted RBP23.44■■□□□ 1.34
SSBP4-202ENST00000348495 FLNCQ14315 2725 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF35P13682 527 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 CCNOP22674 350 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 GABRA5P31644 462 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 SNAI3Q3KNW1 292 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 OR5AK2Q8NH90 309 aa23.43■■□□□ 1.34
SSBP4-202ENST00000348495 GPRIN2O60269 458 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 WNT5AP41221 380 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 RPS25P62851 125 aaKnown RBP23.42■■□□□ 1.34
SSBP4-202ENST00000348495 OR52H1Q8NGJ2 320 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 RGP1Q92546 391 aaPredicted RBP23.42■■□□□ 1.34
SSBP4-202ENST00000348495 MED18Q9BUE0 208 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 FUNDC2Q9BWH2 189 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF281Q9Y2X9 895 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 DPPA5A6NC42 116 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 LCATP04180 440 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 ISG15P05161 165 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 RPS11P62280 158 aaKnown RBP eCLIP23.42■■□□□ 1.34
SSBP4-202ENST00000348495 SP140LQ9H930 580 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 N6AMT1Q9Y5N5 214 aa23.42■■□□□ 1.34
SSBP4-202ENST00000348495 SPTBN1Q01082 2364 aaKnown RBP23.42■■□□□ 1.34
SSBP4-202ENST00000348495 IGLV3-1P01715 115 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 ALKBH2Q6NS38 261 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF704Q6ZNC4 412 aaPredicted RBP23.41■■□□□ 1.34
SSBP4-202ENST00000348495 RDH10Q8IZV5 341 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 TMEM203Q969S6 136 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 ZC3HAV1LQ96H79 300 aaKnown RBP23.41■■□□□ 1.34
SSBP4-202ENST00000348495 PGAM5Q96HS1 289 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 TMED9Q9BVK6 235 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 CDH20Q9HBT6 801 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 NDRG3Q9UGV2 375 aa23.41■■□□□ 1.34
SSBP4-202ENST00000348495 M0R1B8 84 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 NAAAQ02083 359 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 SRSF1Q07955 248 aaKnown RBP eCLIP23.4■■□□□ 1.345e-7■□□□□ 10.3
SSBP4-202ENST00000348495 SNTB1Q13884 538 aaKnown RBP23.4■■□□□ 1.34
SSBP4-202ENST00000348495 CD200R1LQ6Q8B3 271 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 WFDC8Q8IUA0 241 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF101Q8IZC7 436 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 MS4A15Q8N5U1 240 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 ZNF676Q8N7Q3 588 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 APOBEC3DQ96AK3 386 aaPredicted RBP23.4■■□□□ 1.34
SSBP4-202ENST00000348495 COMMD4Q9H0A8 199 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 TBCCD1Q9NVR7 557 aa23.4■■□□□ 1.34
SSBP4-202ENST00000348495 IGHV2OR16-5A0A0B4J2B6 119 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 A0A0U1RQV5 110 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 UBCP0CG48 685 aaKnown RBP23.39■■□□□ 1.34
SSBP4-202ENST00000348495 RNF224P0DH78 156 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 ODF4Q2M2E3 257 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 YIF1BQ5BJH7 314 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 GPR107Q5VW38 600 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 LINC01560Q8TB33 94 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 OR10A2Q9H208 303 aa23.39■■□□□ 1.34
SSBP4-202ENST00000348495 USP9XQ93008 2570 aaPredicted RBP23.39■■□□□ 1.34
SSBP4-202ENST00000348495 ADGRG4Q8IZF6 3080 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 DOPEY1Q5JWR5 2465 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 SC5DO75845 299 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 NGFP01138 241 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 PLA2G2AP14555 144 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 GADD45AP24522 165 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 PSMA1P25786 263 aaKnown RBP23.39■■□□□ 1.33
SSBP4-202ENST00000348495 CRYBB2P43320 205 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 TRAM1Q15629 374 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 SLC16A12Q6ZSM3 486 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 ANKRD13BQ86YJ7 626 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 OR13C5Q8NGS8 318 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 OR10AC1Q8NH08 325 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 RBM38Q9H0Z9 239 aaKnown RBP23.39■■□□□ 1.33
SSBP4-202ENST00000348495 CEPT1Q9Y6K0 416 aa23.39■■□□□ 1.33
SSBP4-202ENST00000348495 A0A1B0GTI1 187 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 H3BSA7 217 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 J3QW42 95 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 P2RY10O00398 339 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 PCSK6P29122 969 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms