RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SERPINA3P01011 423 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NMBP08949 121 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 CLDN12P56749 244 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 HSF1Q00613 529 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 POU4F2Q12837 409 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 OR1C1Q15619 314 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 SFRP4Q6FHJ7 346 aaPredicted RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NKX6-2Q9C056 277 aaPredicted RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF700Q9H0M5 742 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 EVA1AQ9H8M9 152 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NDRG3Q9UGV2 375 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 KLHDC2Q9Y2U9 406 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 GPR171O14626 319 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 KLK10O43240 276 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ARL6IP5O75915 188 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 LCN1P31025 176 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 GDNFP39905 211 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 KLF9Q13886 244 aaPredicted RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 CMTM4Q8IZR5 234 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 FAM71CQ8NEG0 241 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NKD1Q969G9 470 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 PAPOLGQ9BWT3 736 aaKnown RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 FKRPQ9H9S5 495 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 HIF3AQ9Y2N7 669 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ARID1AO14497 2285 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 SPTBN1Q01082 2364 aaKnown RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 HPXP02790 462 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 BGLAPP02818 100 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 UCHL1P09936 223 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ASAH2BP0C7U1 165 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 LIFP15018 202 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 MLF1P58340 268 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 SERPINA12Q8IW75 414 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 C12orf45Q8N5I9 185 aaPredicted RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
COL18A1-201ENST00000342220 AMELYQ99218 206 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 PTDSS2Q9BVG9 487 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NOX4Q9NPH5 578 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 DEPPQ9NTK1 212 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 PINLYPA6NC86 204 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 OR2T7P0C7T2 308 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 APOBEC1P41238 236 aaKnown RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 EIF2B1Q14232 305 aaKnown RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 HAGHLQ6PII5 290 aaPredicted RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 LINC00114Q6XXX2 140 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 BTN2A1Q7KYR7 527 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 OR2T27Q8NH04 317 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF845Q96IR2 970 aaPredicted RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 AIPO00170 330 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 PLPP3O14495 311 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 PIN1P1O15428 100 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 SERPINA7P05543 415 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 PATE4P0C8F1 98 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 PVALBP20472 110 aaPredicted RBP11.63□□□□□ -0.55
COL18A1-201ENST00000342220 CCNOP22674 350 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 FAM74A1Q5RGS3 127 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 SFRP5Q5T4F7 317 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 OR1M1Q8NGA1 313 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 ELMOD3Q96FG2 381 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 INTS14Q96SY0 518 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 GFI1Q99684 422 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 PTTG3PQ9NZH4 202 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 SLC22A13Q9Y226 551 aa11.63□□□□□ -0.55
COL18A1-201ENST00000342220 IGKV1D-43A0A0B4J1Z2 117 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 A0A1W2PQD3 144 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ADH7P40394 386 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MAGEA5P43359 124 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SLC6A9P48067 706 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ACTA2P62736 377 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ACTG2P63267 376 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 LIPNQ5VXI9 398 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MISPQ8IVT2 679 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SYS1Q8N2H4 156 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 GALNT16Q8N428 558 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 POC1BQ8TC44 478 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SMIM4Q8WVI0 70 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 PDCD10Q9BUL8 212 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ELOVL3Q9HB03 270 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 DLL4Q9NR61 685 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 RCE1Q9Y256 329 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 PTPRQQ9UMZ3 2332 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 PRSS37A4D1T9 235 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MAS1P04201 325 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ALDOBP05062 364 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 FGF2P09038 288 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ZP1P60852 638 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms