RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 LINC00322Q6ZN03 302 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-201ENST00000340660 C16orf62Q7Z3J2 963 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 SLC30A8Q8IWU4 369 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 OR6Q1Q8NGQ2 317 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 PSMA8Q8TAA3 256 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 PTP4A1Q93096 173 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 A0A087WUJ7 227 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 IMPA2O14732 288 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 GLCEO94923 617 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 GUSBP08236 651 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 NQO1P15559 274 aaKnown RBP8.53□□□□□ -1.04
ATXN3-201ENST00000340660 TUBG1P23258 451 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 CD200P41217 278 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF75DP51815 510 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 MVDP53602 400 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 ERVK-25P63136 954 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 C2orf54Q08AI8 447 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 SPDYE7PQ495Y7 208 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 PDCD4Q53EL6 469 aaKnown RBP8.53□□□□□ -1.04
ATXN3-201ENST00000340660 C9orf152Q5JTZ5 239 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 FAM69AQ5T7M9 428 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 ACSM6Q6P461 480 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 CLDN22Q8N7P3 220 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 BHLHE23Q8NDY6 225 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 OR6S1Q8NH40 331 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 FAM76AQ8TAV0 307 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 METTL6Q8TCB7 284 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 SLC41A3Q96GZ6 507 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 OR2H1Q9GZK4 316 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 TUBG2Q9NRH3 451 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-201ENST00000340660 OAZ3Q9UMX2 235 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 TIMM22Q9Y584 194 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 CEPT1Q9Y6K0 416 aa8.53□□□□□ -1.04
ATXN3-201ENST00000340660 MUC2Q02817 5179 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 A0A1W2PQ09 198 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 NDUFB3O43676 98 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 RHCEP18577 417 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 MATN1P21941 496 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 FPR3P25089 353 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 CRABP2P29373 138 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 HMOX2P30519 316 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 CDAP32320 146 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 MAGEA4P43358 317 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 ECH1Q13011 328 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 FAM83EQ2M2I3 478 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 MRPL2Q5T653 305 aaKnown RBP8.52□□□□□ -1.05
ATXN3-201ENST00000340660 C16orf82Q7Z2V1 217 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 OR6X1Q8NH79 312 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 SFXN5Q8TD22 340 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 FOXRED1Q96CU9 486 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-201ENST00000340660 MALSU1Q96EH3 234 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF582Q96NG8 517 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-201ENST00000340660 KCNA7Q96RP8 456 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 TMED9Q9BVK6 235 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 RLIMQ9NVW2 624 aa8.52□□□□□ -1.05
ATXN3-201ENST00000340660 ACOT8O14734 319 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 PGA4P0DJD7 388 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 PGA3P0DJD8 388 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 HSD17B3P37058 310 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 ENTPD1P49961 510 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 PUDPQ08623 228 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 Q6ZSN1 163 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 HAPLN4Q86UW8 402 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 NUDCD3Q8IVD9 361 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 GVQW1Q8N7I0 195 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 PHLDA1Q8WV24 401 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-201ENST00000340660 MCHR2Q969V1 340 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 CPNE1Q99829 537 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 BAG1Q99933 345 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-201ENST00000340660 KCNN2Q9H2S1 579 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 IKZF5Q9H5V7 419 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 SIAEQ9HAT2 523 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 POLE3Q9NRF9 147 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 LINC00527Q9UJ94 153 aa8.51□□□□□ -1.05
ATXN3-201ENST00000340660 A0A0J9YWU9 116 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 MAGEA13PA6NCF6 341 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 DUXAA6NLW8 204 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 OR2T1O43869 369 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 FAM153BP0C7A2 387 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-201ENST00000340660 PRG2P13727 222 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 CDX1P47902 265 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-201ENST00000340660 TGM4P49221 684 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 KLF10Q13118 480 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 KIAA0040Q15053 153 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 LRRC10Q5BKY1 277 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF836Q6ZNA1 936 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF826PQ6ZT77 177 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 PXKQ7Z7A4 578 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 PATL1Q86TB9 770 aaKnown RBP8.5□□□□□ -1.05
ATXN3-201ENST00000340660 CCDC170Q8IYT3 715 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 CLEC4FQ8N1N0 589 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 COMMD1Q8N668 190 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms