RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
BRAT1-201ENST00000340611 SLC25A18Q9H1K4 315 aa13.5□□□□□ -0.25
BRAT1-201ENST00000340611 TMPRSS5Q9H3S3 457 aa13.5□□□□□ -0.25
BRAT1-201ENST00000340611 SPENQ96T58 3664 aaKnown RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 A0A087X0M5 115 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 A0A1B0GX30 115 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 G3V3Y1 287 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 SOX15O60248 233 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 CDC40O60508 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 SC5DO75845 299 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 LYPD3O95274 346 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 PMP2P02689 132 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 SBK2P0C263 348 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 BMP7P18075 431 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ITPKBP27987 946 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 MAGEB1P43366 347 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 HTR5AP47898 357 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 NOVA1P51513 510 aaKnown RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 GABREP78334 506 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF117Q03924 483 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 DYRK1AQ13627 763 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ATP1A1-AS1Q5TC04 95 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 UNQ6126/PRO20091Q6UXV3 157 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 POMGNT2Q8NAT1 580 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 OR51A7Q8NH64 312 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 CPNE4Q96A23 557 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF230Q9UIE0 474 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 FARSAQ9Y285 508 aaKnown RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 PTPRBP23467 1997 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 TRAV27A0A087WT01 109 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 OR14I1A6ND48 311 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 BHLHE40O14503 412 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 KCNAB3O43448 404 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 PRAF2O60831 178 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ABOP16442 354 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 F2RL1P55085 397 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 CRMP1Q14194 572 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ALG10BQ5I7T1 473 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 DMKNQ6E0U4 476 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF433Q8N7K0 673 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 THEM6Q8WUY1 208 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 TNFAIP8L1Q8WVP5 186 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 ADGRL4Q9HBW9 690 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 GPN1Q9HCN4 374 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 MYOTQ9UBF9 498 aa13.49□□□□□ -0.25
BRAT1-201ENST00000340611 C19orf25Q9UFG5 118 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-201ENST00000340611 DAOP14920 347 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 Q0VFX4 171 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 REC114Q7Z4M0 266 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 PDCD1LG2Q9BQ51 273 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 LAT2Q9GZY6 243 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 C9orf170A2RU37 121 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 LRP3O75074 770 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 KRT33AO76009 404 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 UBBP0CG47 229 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 UBCP0CG48 685 aaKnown RBP13.48□□□□□ -0.25
BRAT1-201ENST00000340611 DLX5P56178 289 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 NRG3P56975 720 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 RPS27AP62979 156 aaKnown RBP13.48□□□□□ -0.25
BRAT1-201ENST00000340611 UBA52P62987 128 aaKnown RBP13.48□□□□□ -0.25
BRAT1-201ENST00000340611 GFOD2Q3B7J2 385 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 TEX30Q5JUR7 227 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 PRAMEF20Q5VT98 475 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF561Q8N587 486 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 FAM71CQ8NEG0 241 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 SLC39A7Q92504 469 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 DDA1Q9BW61 102 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 PPP4R1LQ9P1A2 415 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 ABRACLQ9P1F3 81 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
BRAT1-201ENST00000340611 ARID1AO14497 2285 aa13.48□□□□□ -0.25
BRAT1-201ENST00000340611 NSG1A0A0A6YYJ2 146 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 KANTRA0A1W2PQU2 76 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 SHISA8B8ZZ34 492 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 TRAM1Q15629 374 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 PDZD11Q5EBL8 140 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ZNF626Q68DY1 528 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 IMMP1LQ96LU5 166 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 FAM117AQ9C073 453 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 TSPAN10Q9H1Z9 355 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-201ENST00000340611 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 RPS10P5Q9NQ39 176 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 ST6GALNAC2Q9UJ37 374 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 A0A0B4J2E0 115 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 A0A1B0GX12 115 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 UBE2QL1A1L167 161 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 SLC22A31A6NKX4 558 aa13.47□□□□□ -0.25
BRAT1-201ENST00000340611 PYCARD-AS1I3L0S3 204 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms