RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 LAMA4Q16363 1823 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ZCWPW2A0A1B0GU75 182 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ACAA1P09110 424 aaPredicted RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 SOX18P35713 384 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 PLP1P60201 277 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 GNG4P50150 75 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ELOBQ15370 118 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 TOMM34Q15785 309 aaPredicted RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 UBQLN3Q9H347 655 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 MED17Q9NVC6 651 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 G6PCP35575 357 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 Q6ZNX1 250 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 MFSD4AQ8N468 514 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 SLC38A5Q8WUX1 472 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 CXorf58Q96LI9 332 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 IGLV3-22A0A075B6J6 115 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 SH2D1BO14796 132 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 IL5P05113 134 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 SNRPNP63162 240 aaKnown RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 FUT2Q10981 343 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 Q6ZSR6 202 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 MBOAT2Q6ZWT7 520 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ASB13Q8WXK3 278 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 MAP6Q96JE9 813 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 PIAS3Q9Y6X2 628 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 C7orf72A4D263 438 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 GLTPD2A6NH11 291 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 NPIPB15A6NHN6 443 aaPredicted RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 ZNF816Q0VGE8 651 aaPredicted RBP11.75□□□□□ -0.53
USP47-202ENST00000339865 SHHQ15465 462 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 PLA1AQ53H76 456 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 CBLL1Q75N03 491 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 GJC3Q8NFK1 279 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 SPNS1Q9H2V7 528 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 RHBDL1O75783 438 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 ALDOCP09972 364 aaKnown RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 KIR2DS1A0A191URI9 304 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 OR2J2O76002 312 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CSN3P07498 182 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 KIR2DS4P43632 304 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 KIR2DS1Q14954 304 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 LSM2Q9Y333 95 aaKnown RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 VWDEQ8N2E2 1590 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 M0QZK8 103 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 GALR3O60755 368 aaPredicted RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 TCTAP57738 103 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 GLCCI1Q86VQ1 547 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 C17orf78Q8N4C9 275 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 VGLL2Q8N8G2 317 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 ZNF485Q8NCK3 441 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CDCP1Q9H5V8 836 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CLMPQ9H6B4 373 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CHST2Q9Y4C5 530 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 SLCO1B1Q9Y6L6 691 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 SOWAHCQ53LP3 525 aaPredicted RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 EGLN1Q9GZT9 426 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 SFXN1Q9H9B4 322 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 G3V3Y1 287 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 SPRED3Q2MJR0 410 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CHST8Q9H2A9 424 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 TAS2R4Q9NYW5 299 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 BLACEA4D250 179 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 HEPACAM2A8MVW5 462 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CST7O76096 145 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 CLEC2LP0C7M8 214 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
USP47-202ENST00000339865 MRPS24Q96EL2 167 aaKnown RBP11.74□□□□□ -0.53
USP47-202ENST00000339865 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 FAM221AA4D161 298 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 HERVK_113P61574 105 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CLEC14AQ86T13 490 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MEIKINA0A087WXM9 373 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 NTSR1P30989 418 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CLDN2P57739 230 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 OR2L13Q8N349 312 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms