RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 B2MP61769 119 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 HES1Q14469 280 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 VRK3Q8IV63 474 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 HGDQ93099 445 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CD207Q9UJ71 328 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 SLC17A4Q9Y2C5 497 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 FAM208AQ9UK61 1670 aaKnown RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 M0QZQ0 153 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 SEMG1P04279 462 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 IL5P05113 134 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CNN1P51911 297 aaKnown RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 MFSD12Q6NUT3 480 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 WDR74Q6RFH5 385 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 MISPQ8IVT2 679 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM229BQ8NBD8 167 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 GJC3Q8NFK1 279 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 RGS13O14921 159 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 SDHBP21912 280 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 DHODHQ02127 395 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CD300CQ08708 224 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 OR51F2Q8NH61 342 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 OR2A14Q96R47 310 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ZDHHC5Q9C0B5 715 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 DLL4Q9NR61 685 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 COL14A1Q05707 1796 aaKnown RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 MED1Q15648 1581 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 MEIKINA0A087WXM9 373 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 NSG1A0A0A6YYJ2 146 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 NKX6-3A6NJ46 265 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 IQCF3P0C7M6 154 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CD200P41217 278 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 SULT1A2P50226 295 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 PPOXP50336 477 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CCL11P51671 97 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 STUMQ69YW2 141 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CDC20BQ86Y33 519 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF573Q86YE8 665 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 BHLHE23Q8NDY6 225 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 NDFIP1Q9BT67 221 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 GPR87Q9BY21 358 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM9BQ9NQ34 198 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ASIC5Q9NY37 505 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 PLEKHB1Q9UF11 243 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 TBX19O60806 448 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 POU2F2P09086 479 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 CSNK1DP48730 415 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 BPIFB3P59826 476 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ERVS71-1P61550 626 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF740Q8NDX6 193 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 SMIM4Q8WVI0 70 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 PINX1Q96BK5 328 aaKnown RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 TRIB1Q96RU8 372 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 EDEM2Q9BV94 578 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 TRAPPC4Q9Y296 219 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 RBP2P50120 134 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 XKR7Q5GH72 579 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 C1orf140Q5VVS0 124 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ERGIC1Q969X5 290 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 CMC2Q9NRP2 79 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 RALYQ9UKM9 306 aaKnown RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 KIR2DS5A0A0G2JLQ3 304 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 A0A0G2JNG1 304 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 KIR2DS3K7RE56 304 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ADH4P08319 380 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 KIR2DS5Q14953 304 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 MPPED2Q15777 294 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SLC48A1Q6P1K1 146 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ANKRD16Q6P6B7 361 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 MYPOPQ86VE0 399 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SMIM19Q96E16 107 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 LCORQ96JN0 433 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 C19orf43Q9BQ61 176 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 PRDM7Q9NQW5 492 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SRPK3Q9UPE1 567 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SOX15O60248 233 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 WDR1O75083 606 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ONECUT2O95948 504 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 GUSBP08236 651 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 PFN3P60673 137 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 CTBSQ01459 385 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 TRNP1Q6NT89 227 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SLC35B3Q9H1N7 401 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ESRP2Q9H6T0 727 aaKnown RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ADGRL4Q9HBW9 690 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 TAAR2Q9P1P5 351 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SLC45A1Q9Y2W3 748 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 MED19A0JLT2 244 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 FCN1O00602 326 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 CST7O76096 145 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 PRTGQ2VWP7 1150 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 ABLIM2Q6H8Q1 611 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 OR5AS1Q8N127 324 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SLC16A11Q8NCK7 471 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms