RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MUC20Q8N307 709 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 OR5D14Q8NGL3 314 aa13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 PAQR8Q8TEZ7 354 aa13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 DKKL1Q9UK85 242 aa13.15□□□□□ -0.3
CLCNKA-201ENST00000331433 A0A087WZY1 265 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SULT1C2O00338 296 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 PMS2P2O95744 297 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 GIPP09681 153 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF20P17024 532 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 RAB3AP20336 220 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 CX3CR1P49238 355 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 H3F3AP84243 136 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SGCAQ16586 387 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 PHYHD1Q5SRE7 291 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC22A24Q8N4F4 322 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 OR4S1Q8NGB4 309 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF416Q9BWM5 594 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SCPEP1Q9HB40 452 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 GLTPQ9NZD2 209 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 RAB27BO00194 218 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 NCOR1O75376 2440 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 WDPCPO95876 746 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 CYB5AP00167 134 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 AMY2AP04746 511 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 DMRTC1Q5HYR2 192 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 IDO2Q6ZQW0 420 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM229BQ8NBD8 167 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 PTX4Q96A99 478 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SH2D2AQ9NP31 389 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 FARSAQ9Y285 508 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC5A6Q9Y289 635 aa13.14□□□□□ -0.31
CLCNKA-201ENST00000331433 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 C5orf63A6NC05 138 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 METTL21EPA6NDL7 271 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 CSN2P05814 226 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 RAB6AP20340 208 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 H2BFSP57053 126 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 MLF1P58340 268 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 QRFPP83859 136 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF529Q6P280 563 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM81Q6P7N7 255 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 FAM57BQ71RH2 274 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 OR8H3Q8N146 312 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF283Q8N7M2 679 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 CHST4Q8NCG5 386 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 POFUT1Q9H488 388 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 MOB1AQ9H8S9 216 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A1W2PRS3 328 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 PMS2P1A4D2B8 440 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 A6NJ64 397 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF736B4DX44 427 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 E9PLN8 166 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 TLX3O43711 291 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC22A5O76082 557 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 OR2A4O95047 310 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF93P35789 620 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 CSNK1A1P48729 337 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 GRK1Q15835 563 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 KCNMB1Q16558 191 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 CCDC157Q569K6 752 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 AWAT2Q6E213 333 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 ANGPTL5Q86XS5 388 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 AQP3Q92482 292 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
CLCNKA-201ENST00000331433 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 GOSR2O14653 212 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 TNFSF11O14788 317 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ITGB2P05107 769 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF17P17021 662 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ENPP1P22413 925 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 OTX2P32243 289 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 NKPD1Q17RQ9 610 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 SCGB2B2Q4G0G5 96 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC22A6Q4U2R8 563 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 FJX1Q86VR8 437 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms