RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 WFIKKN1Q96NZ8 548 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 RAB9BQ9NP90 201 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 DYNLRB1Q9NP97 96 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 GLS2Q9UI32 602 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 FOXJ3Q9UPW0 622 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LRP12Q9Y561 859 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 FAM221AA4D161 298 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NKX2-6A6NCS4 301 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 FAM183AA6NL82 134 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 TRIM64CA6NLI5 447 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LRRC30A6NM36 301 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NDUFS8O00217 210 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 SMPD2O60906 423 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 GPX5O75715 221 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 DHRS3O75911 302 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 HLA-HP01893 362 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 MT-ND2P03891 347 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ALDOBP05062 364 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NAT2P11245 290 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 FSTP19883 344 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 MYL9P24844 172 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF181Q2M3W8 571 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LINGO2Q7L985 606 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 FAM90A1Q86YD7 464 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 SAXO1Q8IYX7 474 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LRRC18Q8N456 261 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 PNLDC1Q8NA58 520 aaKnown RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 OR1J1Q8NGS3 322 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 RPS4Y2Q8TD47 263 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 APH1BQ8WW43 257 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF775Q96BV0 537 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 SMIM19Q96E16 107 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CENPOQ9BU64 300 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CCDC90BQ9GZT6 254 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 PLK3Q9H4B4 646 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 POLDIP2Q9Y2S7 368 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NCOR2Q9Y618 2525 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 A0A096LPE4 126 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 A0A1W2PPW3 197 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 A0A1W2PPZ6 126 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 C5orf49A4QMS7 147 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 J3QLW9 94 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 TIMM8AO60220 97 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LCKP06239 509 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 IGFBP1P08833 259 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 OCM2P0CE71 109 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 OCMP0CE72 109 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 IRF2P14316 349 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF19P17023 458 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CCKARP32238 428 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NKX6-1P78426 367 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LSM11P83369 360 aaKnown RBP eCLIP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CDK5R1Q15078 307 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CLVS2Q5SYC1 327 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF684Q5T5D7 378 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF774Q6NX45 483 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 LHFPL2Q6ZUX7 228 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 PEG10Q86TG7 708 aaKnown RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 TPRA1Q86W33 373 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 RPRMLQ8N4K4 120 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ZSCAN4Q8NAM6 433 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 KBTBD8Q8NFY9 601 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 ABHD4Q8TB40 342 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 PIK3IP1Q96FE7 263 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 TIMD4Q96H15 378 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NUDT16L1Q9BRJ7 211 aaKnown RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 PBOV1Q9GZY1 135 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 CXXC4Q9H2H0 198 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 MED20Q9H944 212 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 NPDC1Q9NQX5 325 aaPredicted RBP4.48□□□□□ -1.69
LRIT3-201ENST00000327908 BATF3Q9NR55 127 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 RASL12Q9NYN1 266 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 SSR3Q9UNL2 185 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 DHDHQ9UQ10 334 aa4.48□□□□□ -1.69
LRIT3-201ENST00000327908 IGLV3-9A0A075B6K5 115 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 A0A1W2PQL4 384 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 POM121CA8CG34 1229 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 H7C417 338 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 M0R233 179 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CCRL2O00421 344 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 TBX1O43435 398 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 SYT7O43581 403 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PLPP2O43688 288 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 RGS9O75916 674 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 IGHV3-9P01782 118 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 KLK2P20151 261 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PCMT1P22061 227 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 GABRA5P31644 462 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ATP1B3P54709 279 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF121P58317 390 aaPredicted RBP4.47□□□□□ -1.69
LRIT3-201ENST00000327908 OR8B8Q15620 311 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 OR5D14Q8NGL3 314 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 OR2G2Q8NGZ5 317 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF671Q8TAW3 534 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 CNIH3Q8TBE1 160 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 DMRTB1Q96MA1 342 aa4.47□□□□□ -1.69
LRIT3-201ENST00000327908 PNRC2Q9NPJ4 139 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms