RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ARPC1BO15143 372 aaKnown RBP11.65□□□□□ -0.55
CPNE1-201ENST00000317677 GPR37O15354 613 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SLC25A12O75746 678 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 GATBO75879 557 aaKnown RBP11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SPDEFO95238 335 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.55
CPNE1-201ENST00000317677 ADCYAP1P18509 176 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 GRPRP30550 384 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 MNDAP41218 407 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 NAA10P41227 235 aaPredicted RBP11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SPCS3P61009 180 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 RAB4BP61018 213 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 EXT1Q16394 746 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 ACER2Q5QJU3 275 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SFRP4Q6FHJ7 346 aaPredicted RBP11.65□□□□□ -0.55
CPNE1-201ENST00000317677 DHRS13Q6UX07 377 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 NAA40Q86UY6 237 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 ZFP82Q8N141 532 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 OR2M3Q8NG83 312 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 STK35Q8TDR2 534 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 TCTEX1D2Q8WW35 142 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 ZFP3Q96NJ6 502 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 PFDN5Q99471 154 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 DDA1Q9BW61 102 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SCNM1Q9BWG6 230 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 SEC11CQ9BY50 192 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 METTL7AQ9H8H3 244 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 PROK2Q9HC23 129 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 PPP4R1LQ9P1A2 415 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 ALPK2Q86TB3 2170 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 FXYD6-FXYD2A0A087WZ82 144 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 PRR32B1ATL7 298 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 C11orf98E9PRG8 122 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
CPNE1-201ENST00000317677 MT-CO3P00414 261 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 MT-ATP6P00846 226 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 TCN2P20062 427 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 AGAP20933 346 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 SHC1P29353 583 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 OR12D2P58182 307 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 TAS2R60P59551 318 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 SGCBQ16585 318 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 SLC25A53Q5H9E4 307 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 PRAMEF20Q5VT98 475 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 NDUFAF7Q7L592 441 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 MAMDC2Q7Z304 686 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-201ENST00000317677 WDFY1Q8IWB7 410 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 FADS6Q8N9I5 356 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 OR5J2Q8NH18 312 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM234Q8WY98 164 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 FXYD6Q9H0Q3 95 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
CPNE1-201ENST00000317677 NSG1A0A0A6YYJ2 146 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 RFPL4AA6NLU0 287 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 F5H5P2 479 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 RFPL4AL1F8VTS6 287 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 PLPP3O14495 311 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 SLC31A2O15432 143 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 KRT33AO76009 404 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 IGHV2-5P01817 119 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 JMJD7P0C870 316 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 LAP3P28838 519 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 AGTR1P30556 359 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 OTX2P32243 289 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 SLC25A1P53007 311 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 PPIAP62937 165 aaKnown RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 PEA15Q15121 130 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 SLC35D3Q5M8T2 416 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 PXKQ7Z7A4 578 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF417Q8TAU3 575 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 WDR89Q96FK6 387 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 C4orf36Q96KX1 117 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF587Q96SQ5 575 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 CNN2Q99439 309 aaKnown RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 WASF3Q9UPY6 502 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 KHDRBS3O75525 346 aaKnown RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 GLCEO94923 617 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 NDUFB6O95139 128 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 AHSA1O95433 338 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-201ENST00000317677 RAB40ALP0C0E4 278 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 CCL3P10147 92 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF44P15621 663 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ART1P52961 327 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 H2BFSP57053 126 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 POU4F2Q12837 409 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 MELKQ14680 651 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 H3F3CQ6NXT2 135 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 RPTNQ6XPR3 784 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF813Q6ZN06 617 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms