RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 INTS1Q8N201 2190 aaKnown RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 IGHV3-64DA0A0J9YX35 117 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF587BE7ETH6 402 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 GMDSO60547 372 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 EIF1BO60739 113 aaKnown RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF708P17019 499 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CD53P19397 219 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 MSR1P21757 451 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ACKR3P25106 362 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 GPR176Q14439 515 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 OLFML2AQ68BL7 652 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 C1QL2Q7Z5L3 287 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 SIAH3Q8IW03 269 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ADPRHL1Q8NDY3 354 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 BEST4Q8NFU0 473 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 OR10K1Q8NGX5 313 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CCDC32Q9BV29 185 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CNTD2Q9H8S5 307 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF629Q9UEG4 869 aaPredicted RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZFYVE26Q68DK2 2539 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 IGKV1-9A0A0C4DH69 117 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NPIPB13A6NJU9 1138 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NPIPB4C9JG80 1138 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HPNP05981 417 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 DCTDP32321 178 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 PTH2RP49190 550 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HOXA4Q00056 320 aaPredicted RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 FAPQ12884 760 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 TRAM1Q15629 374 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 MZT2AQ6P582 158 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 MYPOPQ86VE0 399 aaPredicted RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 MICU1Q9BPX6 476 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 C1QTNF6Q9BXI9 259 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 PRRG4Q9BZD6 226 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZCCHC4Q9H5U6 513 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CAMK2AQ9UQM7 478 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 TMEM272A0A1B0GTI8 110 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF878C9JN71 531 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 SMLR1H3BR10 107 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HRGP04196 525 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CEACAM1P13688 526 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CAPZA2P47755 286 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 MMP16P51512 607 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 SCN1BQ07699 218 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HIKESHIQ53FT3 197 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 TMEM104Q8NE00 496 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HAVCR2Q8TDQ0 301 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 CHAC2Q8WUX2 184 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NICN1Q9BSH3 213 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 ABCG5Q9H222 651 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NKIRAS2Q9NYR9 191 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 HHLA2Q9UM44 414 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 NOSIPQ9Y314 301 aaKnown RBP6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 KCNMB2Q9Y691 235 aa6.13□□□□□ -1.43
LYSMD3-201ENST00000315948 LYRM1O43325 122 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 OR3A4PP47883 348 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PSG4Q00888 419 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 JMJD6Q6NYC1 403 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ELMOD2Q8IZ81 293 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 GDPD1Q8N9F7 314 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF454Q8N9F8 522 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ZFP62Q8NB50 900 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FAM3DQ96BQ1 224 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 NAA11Q9BSU3 229 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 BANF2Q9H503 90 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 GPR35Q9HC97 309 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF275Q9NSD4 429 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FOXJ3Q9UPW0 622 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 SPTAN1Q13813 2472 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 CFAP46Q8IYW2 2715 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 LOC102725191A0A1B0GVB3 256 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 CENPBD1B2RD01 187 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ORC5O43913 435 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 KRT33AO76009 404 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FAM157BP0CG42 384 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 TALDO1P37837 337 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 NR4A2P43354 598 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ARF1P84077 181 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 TNK1Q13470 666 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 SLC10A1Q14973 349 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ALKBH2Q6NS38 261 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FDX2Q6P4F2 183 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 CRIP3Q6Q6R5 217 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 NCCRP1Q6ZVX7 275 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 C19orf18Q8NEA5 215 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PIGTQ969N2 578 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 SLC25A28Q96A46 364 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 KCNJ15Q99712 375 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FOXB1Q99853 325 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 SCNM1Q9BWG6 230 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 TMEM38BQ9NVV0 291 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 NUFIP1Q9UHK0 495 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 RCE1Q9Y256 329 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 RHBDD3Q9Y3P4 386 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ZGRF1Q86YA3 2104 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PHYHO14832 338 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms