RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PDCD10Q9BUL8 212 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 B3GNT2Q9NY97 397 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 COQ3Q9NZJ6 369 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 DKKL1Q9UK85 242 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 ADAMTS9Q9P2N4 1935 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 A0A1W2PP11 408 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 SNRPGP15A8MWD9 76 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 LAMTOR5O43504 91 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 CLDN6P56747 220 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 NAXEQ8NCW5 288 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 NICN1Q9BSH3 213 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 C1QTNF6Q9BXI9 259 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 MRPL13Q9BYD1 178 aaKnown RBP10.24□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF319Q9P2F9 582 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 CHCHD2Q9Y6H1 151 aaPredicted RBP10.24□□□□□ -0.77
PTPN2-201ENST00000309660 IL5P05113 134 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 CPN1P15169 458 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 PNLIPP16233 465 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 FSTP19883 344 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 OTX2P32243 289 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 CX3CR1P49238 355 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 GPR85P60893 370 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 PCOLCEQ15113 449 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 SLC22A24Q8N4F4 322 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 NKAIN3Q8N8D7 197 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 OR8B12Q8NGG6 310 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 COQ8AQ8NI60 647 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 SLC6A7Q99884 636 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 NPTNQ9Y639 398 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 D6RAR5 112 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 TLX3O43711 291 aaPredicted RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ISG15P05161 165 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 OR4E1P0C645 316 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 POU3F2P20265 443 aaPredicted RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 P2RX3P56373 397 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 MRPL14Q6P1L8 145 aaKnown RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF813Q6ZN06 617 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 SLC36A1Q7Z2H8 476 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF385AQ96PM9 386 aaKnown RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 HPF1Q9NWY4 346 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 OPN4Q9UHM6 478 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 NSG1A0A0A6YYJ2 146 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 NPIPA2E9PIF3 369 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 NPIPA3F8WFD2 350 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 SCO1O75880 301 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 HLA-AP01891 365 aaKnown RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 UNC119Q13432 240 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ESCO2Q56NI9 601 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 GLIPR1L1Q6UWM5 242 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 SPICQ8N5J4 248 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 LIN37Q96GY3 246 aaPredicted RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 PGAM5Q96HS1 289 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 OXGR1Q96P68 337 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF416Q9BWM5 594 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF224Q9NZL3 707 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 UPB1Q9UBR1 384 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF230Q9UIE0 474 aaPredicted RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 C5orf63A6NC05 138 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 IFNA6P05013 189 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 GABRA1P14867 456 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 AKR1C4P17516 323 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 OR3A4PP47883 348 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 CSNK1A1P48729 337 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 C3P1Q6ZMU1 363 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 TMPPEQ6ZT21 453 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.23□□□□□ -0.77
PTPN2-201ENST00000309660 TMEM104Q8NE00 496 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 OR6S1Q8NH40 331 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 MED30Q96HR3 178 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 SLC17A5Q9NRA2 495 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 HS3ST3B1Q9Y662 390 aa10.23□□□□□ -0.77
PTPN2-201ENST00000309660 RAB27BO00194 218 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 UMODP07911 640 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 HRH1P35367 487 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 PCK2Q16822 640 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 BEX5Q5H9J7 111 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 OPN5Q6U736 354 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 KCTD9Q7L273 389 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 RPS19BP1Q86WX3 136 aaKnown RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 C12orf45Q8N5I9 185 aaPredicted RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 CCDC107Q8WV48 283 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 SLC39A1Q9NY26 324 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 RDH8Q9NYR8 311 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 RAB22AQ9UL26 194 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 MRPS28Q9Y2Q9 187 aaKnown RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 A0A1W2PNV4 684 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 CRTAPO75718 401 aaPredicted RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 SPDEFO95238 335 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 PLATP00750 562 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 PMP2P02689 132 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 SEC61A1P61619 476 aaKnown RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF468Q5VIY5 522 aaPredicted RBP10.22□□□□□ -0.77
PTPN2-201ENST00000309660 TCEAL6Q6IPX3 200 aa10.22□□□□□ -0.77
PTPN2-201ENST00000309660 RHOUQ7L0Q8 258 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms