RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TRAF4Q9BUZ4 470 aaPredicted RBP15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 FGF20Q9NP95 211 aaPredicted RBP15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 CYSLTR2Q9NS75 346 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 SCN3BQ9NY72 215 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 COPS3Q9UNS2 423 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 LAMP3Q9UQV4 416 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 KLHDC2Q9Y2U9 406 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 ABCA12Q86UK0 2595 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 IGLV3-9A0A075B6K5 115 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 GPRIN2O60269 458 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 IGHV3-13P01766 116 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 ERCC1P07992 297 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 CCDC159P0C7I6 412 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 MYL12AP19105 171 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 PRKXP51817 358 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 FBXW12Q6X9E4 464 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 KLF14Q8TD94 323 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 MBD6Q96DN6 1003 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 OR2J1Q9GZK6 312 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 OR10A2Q9H208 303 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 AMBNQ9NP70 447 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 BEX4Q9NWD9 120 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 CHCHD3Q9NX63 227 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 AASSQ9UDR5 926 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 BLOC1S6Q9UL45 172 aa15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 DIMT1Q9UNQ2 313 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 EXOSC1Q9Y3B2 195 aaKnown RBP15.39■□□□□ 0.05
SSSCA1-201ENST00000309328 HRNRQ86YZ3 2850 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 ROS1P08922 2347 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 PLCE1Q9P212 2302 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 TMEM269A0A1B0GVZ9 245 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 METTL15A6NJ78 407 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 DENRO43583 198 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 APOL3O95236 402 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 ATE1O95260 518 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 NGFP01138 241 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 ANXA2P07355 339 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 SOD3P08294 240 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 RPSAP08865 295 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 PAX1P15863 534 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 PPOXP50336 477 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 HCCSP53701 268 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 ZNF121P58317 390 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 KRTAP10-9P60411 292 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 GALEQ14376 348 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 SMN1Q16637 294 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 SWI5Q1ZZU3 235 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 C6orf141Q5SZD1 244 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 CDH24Q86UP0 819 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 SYS1Q8N2H4 156 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 OR52I1Q8NGK6 324 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 SLC25A40Q8TBP6 338 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 IGFBPL1Q8WX77 278 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 OR51B6Q9H340 312 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 MS4A5Q9H3V2 200 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 TPRKBQ9Y3C4 175 aa15.38■□□□□ 0.05
SSSCA1-201ENST00000309328 A0A1W2PPW3 197 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 H7C417 338 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 M0R233 179 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 FAM20BO75063 409 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 CD53P19397 219 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 KITLGP21583 273 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 CDONQ4KMG0 1287 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 ZNF684Q5T5D7 378 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 C11orf71Q6IPW1 123 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 PGAP1Q75T13 922 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 YIPF7Q8N8F6 280 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 HAVCR1Q96D42 359 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 TRMT61AQ96FX7 289 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 TMEM80Q96HE8 168 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 PGAM5Q96HS1 289 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 TBX5Q99593 518 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 MRPL37Q9BZE1 423 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 MRM2Q9UI43 246 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 PSORS1C1Q9UIG5 152 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 DUSP13Q9UII6 198 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 STARD10Q9Y365 291 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 NOP16Q9Y3C1 178 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 SNX5Q9Y5X3 404 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 R4GMQ9 66 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 NAV2Q8IVL1 2488 aa15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 HEATR1Q9H583 2144 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-201ENST00000309328 A0A0U1RQV5 110 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 PLSCR5A0PG75 271 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 OVOL3O00110 214 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 DDOSTP39656 456 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 ZNF85Q03923 595 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 TIGD6Q17RP2 521 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 NKPD1Q17RQ9 610 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 FAM209AQ5JX71 171 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 TMPRSS11AQ6ZMR5 421 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 PRSS45Q7RTY3 260 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 MRPL21Q7Z2W9 205 aaKnown RBP15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 LRRC75A-AS1Q8N1F1 130 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 STX19Q8N4C7 294 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 FTMTQ8N4E7 242 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 ZNF540Q8NDQ6 660 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 BPIFB6Q8NFQ5 453 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 MYDGFQ969H8 173 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 SPSB4Q96A44 273 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms