RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 DIMT1Q9UNQ2 313 aaKnown RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 AMDHD2Q9Y303 409 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 R4GMQ9 66 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 PRR33A8MZF0 331 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 BAXQ07812 192 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 CDC20Q12834 499 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SFTPA2Q8IWL1 248 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 ASB5Q8WWX0 329 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 PBDC1Q9BVG4 233 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SPACA1Q9HBV2 294 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 ANK1P16157 1881 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 WNT1P04628 370 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SCG5P05408 212 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 TBCEQ15813 527 aaPredicted RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SFXN4Q6P4A7 337 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 NUBPLQ8TB37 319 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 S1PR3Q99500 378 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 WDR54Q9H977 334 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 CLEC2DQ9UHP7 191 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SLCO1B1Q9Y6L6 691 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 RALGAPA2Q2PPJ7 1873 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 DMRTC1Q5HYR2 192 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 OR2AK2Q8NG84 335 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 OR4C3Q8NH37 302 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 HEYLQ9NQ87 328 aaPredicted RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 ANKRD33BA6NCL7 494 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CRYM-AS1A6NIL9 109 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 MSTNO14793 375 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 SP1P08047 785 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A8P0DMV1 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A9P0DMV2 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 PPP1CBP62140 327 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A2Q5DJT8 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A1Q5HYN5 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 TMEM81Q6P7N7 255 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 VN1R4Q7Z5H5 301 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CT45A3Q8NHU0 189 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 HMGCLL1Q8TB92 370 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ETV7Q9Y603 341 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ZFC3H1O60293 1989 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ZNF816-ZNF321PA0A0X1KG74 233 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 A0A1B0GTL3 188 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ZNF74Q16587 644 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 EIF2S3LQ2VIR3 472 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 KDM4DQ6B0I6 523 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 FBXO7Q9Y3I1 522 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 NKX2-2O95096 273 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 IL1AP01583 271 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 SCGB2A2Q13296 93 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 OR2B11Q5JQS5 317 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ATPAF1Q5TC12 328 aaPredicted RBP9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 IDO2Q6ZQW0 420 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC38A1Q9H2H9 487 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 MMP25Q9NPA2 562 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 MLXQ9UH92 298 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 PRR19A6NJB7 356 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 APEX1P27695 318 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 SNRPGP62308 76 aaKnown RBP9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 ACSM5Q6NUN0 579 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 BRICD5Q6PL45 260 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 OR6M1Q8NGM8 313 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 E9PI62 339 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CCL3P10147 92 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 OMGP23515 440 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 C1orf185Q5T7R7 199 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 CATSPERDQ86XM0 798 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 OR51D1Q8NGF3 324 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 MMP28Q9H239 520 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 PLEKHF2Q9H8W4 249 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 COPS3Q9UNS2 423 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 RCE1Q9Y256 329 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 PIKFYVEQ9Y2I7 2098 aa9.62□□□□□ -0.87
SYNPO2-201ENST00000307142 AIPO00170 330 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 TGIF1Q15583 401 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 CCBE1Q6UXH8 406 aaPredicted RBP9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC25A26Q70HW3 274 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 BBS1Q8NFJ9 593 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 DAZAP1Q96EP5 407 aaKnown RBP9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 NMNAT2Q9BZQ4 307 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 C17orf112F2Z3M2 114 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 TERTO14746 1132 aaKnown RBP9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 CA6P23280 308 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 F2RP25116 425 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 OR51H1Q8NH63 302 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 UBE2FQ969M7 185 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 MCHR2Q969V1 340 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 LRP5LA4QPB2 252 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 A6NHS1 94 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 OR2T2Q6IF00 324 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 PAQR6Q6TCH4 344 aa9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 DVL3Q92997 716 aaPredicted RBP9.61□□□□□ -0.87
SYNPO2-201ENST00000307142 TXNL4BQ9NX01 149 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms