RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MAGEB1P43366 347 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 TPTEP56180 551 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 Q499Y3 187 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 FAM27D1Q5T7N8 215 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 TMEM244Q5VVB8 128 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 PAMR1Q6UXH9 720 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 STAC2Q6ZMT1 411 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 LUZP2Q86TE4 346 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 OR8B12Q8NGG6 310 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 OR51A4Q8NGJ6 313 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 GPR148Q8TDV2 347 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 SHISA3A0PJX4 238 aa21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 PIN1P1O15428 100 aa21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 UCHL1P09936 223 aa21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 UBCP0CG48 685 aaKnown RBP21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 APEX1P27695 318 aaKnown RBP21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 RPS19P39019 145 aaKnown RBP21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 SERPINB10P48595 397 aa21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 BHLHA15Q7RTS1 189 aaPredicted RBP21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 MDP1Q86V88 176 aa21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 RELL2Q8NC24 303 aaPredicted RBP21.42■■□□□ 1.02
GTF2A1-201ENST00000298173 A0A1B0GTI1 187 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 C5orf63A6NC05 138 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 IGLV3-1P01715 115 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 ANXA2P07355 339 aaKnown RBP21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 PSMB1P20618 241 aaKnown RBP21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 ACHEP22303 614 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 UBE2NP61088 152 aaKnown RBP21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 MRPL49Q13405 166 aaKnown RBP21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 FAM57BQ71RH2 274 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 POM121L2Q96KW2 1035 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 DERL3Q96Q80 235 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 MED18Q9BUE0 208 aa21.41■■□□□ 1.02
GTF2A1-201ENST00000298173 SERPINA5P05154 406 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 STOMP27105 288 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 PLP2Q04941 152 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 ASB5Q8WWX0 329 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 DACH2Q96NX9 599 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 SLC24A3Q9HC58 644 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 OBP2BQ9NPH6 170 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 HHLA2Q9UM44 414 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 TRBV5-7A0A0A0MS05 114 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 P2RY10O00398 339 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 IL1AP01583 271 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 OCM2P0CE71 109 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF14P17017 642 aaPredicted RBP21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 SDC2P34741 201 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 SLC6A9P48067 706 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 COLCA1Q6ZS62 124 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 IGSF10Q6WRI0 2623 aa21.4■■□□□ 1.02
GTF2A1-201ENST00000298173 A0A0U1RQV5 110 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 LOC107986453A0A1B0GWG9 222 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 A0A1W2PPK0 400 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 A0A1W2PR80 420 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 OR5H1A6NKK0 313 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 CCL21O00585 134 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 CDRT1O95170 752 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 CCL1P22362 96 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 CALRP27797 417 aaKnown RBP21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 OR52H1Q8NGJ2 320 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 PGAM5Q96HS1 289 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 NOX4Q9NPH5 578 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 ELOVL5Q9NYP7 299 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 N6AMT1Q9Y5N5 214 aa21.39■■□□□ 1.01
GTF2A1-201ENST00000298173 NBASA2RRP1 2371 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 IQCMA0A1B0GVH7 501 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 ARL6IP5O75915 188 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 RAF1P04049 648 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 CBR1P16152 277 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 MTNR1BP49286 362 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 SNAI3Q3KNW1 292 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 OR51E1Q8TCB6 317 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 C1QTNF5Q9BXJ0 243 aa21.38■■□□□ 1.01
GTF2A1-201ENST00000298173 TRAV1-2A0A0B4J238 106 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 EEF1E1-BLOC1S5C9J1V9 151 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 EEF1E1O43324 174 aaKnown RBP21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 IGKV3-15P01624 115 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 MAPK3P27361 379 aaPredicted RBP21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 Q6ZSR3 168 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 PLPP7Q8NBV4 271 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 THRSPQ92748 146 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 TMEM106AQ96A25 262 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SGK3Q96BR1 496 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 MS4A3Q96HJ5 214 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SP140LQ9H930 580 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 PMF1-BGLAPU3KQ54 211 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 PRR14LQ5THK1 2151 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 H3BSH0 61 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 CLEC2LP0C7M8 214 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SOX2P48431 317 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 FAM27E3Q08E93 113 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 TIMM23BQ5SRD1 257 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 ORAI1Q96D31 301 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 LYZL4Q96KX0 146 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 KCNS3Q9BQ31 491 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SOX7Q9BT81 388 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SLIRPQ9GZT3 109 aaKnown RBP21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 GPR84Q9NQS5 396 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 SLC25A15Q9Y619 301 aa21.37■■□□□ 1.01
GTF2A1-201ENST00000298173 C5orf49A4QMS7 147 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms