RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C9orf170A2RU37 121 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 MEGF11A6BM72 1044 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 BCKDHBP21953 392 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 RSPO4Q2I0M5 234 aaPredicted RBP21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 TFAP2EQ6VUC0 442 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 HSD17B13Q7Z5P4 300 aaPredicted RBP21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 MARCH1Q8TCQ1 289 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 MBD2Q9UBB5 411 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 POLR1DQ9Y2S0 133 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 TTLL8A6PVC2 850 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 TDGQ13569 410 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 OR2W3Q7Z3T1 314 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 TMEM185AQ8NFB2 350 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 OR1M1Q8NGA1 313 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 STT3BQ8TCJ2 826 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 SLC2A4RGQ9NR83 387 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 RASL12Q9NYN1 266 aa21.69■■□□□ 1.06
SPTSSA-201ENST00000298130 C5orf51A6NDU8 294 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 FAM74A7A6NL05 159 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 NAGAP17050 411 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 BAMBIQ13145 260 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 FAM74A3Q4VXF1 159 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 LYG2Q86SG7 212 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 C17orf82Q86X59 251 aaPredicted RBP21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 BPIFCQ8NFQ6 507 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 A0A1B0GX78 115 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 CPED1A4D0V7 1026 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 METTL12A8MUP2 240 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 F5H0A9 414 aaPredicted RBP21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 CD8AP01732 235 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 IGHMP01871 453 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 SYT13Q7L8C5 426 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 RNF133Q8WVZ7 376 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 FAM71F1Q96KD3 344 aaPredicted RBP21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 RAB22AQ9UL26 194 aa21.68■■□□□ 1.06
SPTSSA-201ENST00000298130 SSX5O60225 188 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 ISG15P05161 165 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 MELTFP08582 738 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 KLHL24Q6TFL4 600 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 SLC25A42Q86VD7 318 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 KCNRGQ8N5I3 272 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 BHLHE23Q8NDY6 225 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 OR5D18Q8NGL1 313 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 LRRC46Q96FV0 321 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 UCK1Q9HA47 277 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 ZNF319Q9P2F9 582 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 LOC390937A0A1W2PQ73 354 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 MPIG6BO95866 241 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 CLDN6P56747 220 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 NPRL2Q8WTW4 380 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 OIT3Q8WWZ8 545 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 TMEM234Q8WY98 164 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 KLRF1Q9NZS2 232 aa21.67■■□□□ 1.06
SPTSSA-201ENST00000298130 SOCS1O15524 211 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 TIAF1O95411 115 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 UBBP0CG47 229 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 UBCP0CG48 685 aaKnown RBP21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 HNRNPKP61978 463 aaKnown RBP eCLIP21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 RPS27AP62979 156 aaKnown RBP21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 UBA52P62987 128 aaKnown RBP21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 TOMM20Q15388 145 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 APCDD1LQ8NCL9 501 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 MAFIPQ8WZ33 124 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 PRRT1Q99946 306 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 BARX1Q9HBU1 254 aaPredicted RBP21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 CHST11Q9NPF2 352 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 FREM2Q5SZK8 3169 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 RAMP1O60894 148 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 TSPAN9O75954 239 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 IFNA6P05013 189 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 AGTR1P30556 359 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 DNM1P34Q6PK57 102 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 TMPRSS9Q7Z410 1059 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 ARMC10Q8N2F6 343 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 MVB12AQ96EY5 273 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 TMEM41AQ96HV5 264 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 SLCO5A1Q9H2Y9 848 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 SERINC1Q9NRX5 453 aa21.66■■□□□ 1.06
SPTSSA-201ENST00000298130 A0A0A6YYD4 124 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 A0A0D9SG52 128 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 C5orf63A6NC05 138 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ZNF814B7Z6K7 855 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ICAM2P13598 275 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ZNF93P35789 620 aaPredicted RBP21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 OR3A4PP47883 348 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 NPY4RP50391 375 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 DAP3P51398 398 aaKnown RBP21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ABHD12BQ7Z5M8 362 aaPredicted RBP21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 ADAT1Q9BUB4 502 aaKnown RBP21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 RER1O15258 196 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 CASRP41180 1078 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 EMP2P54851 167 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 RAB30Q15771 203 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 GLIPR1L1Q6UWM5 242 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 SLC25A32Q9H2D1 315 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 LDAHQ9H6V9 325 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 A6NIZ1 184 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 MPTX1A8MV57 137 aa21.65■■□□□ 1.06
SPTSSA-201ENST00000298130 BCL2L11O43521 198 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms