RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 Q9N2J8 555 aa13.36□□□□□ -0.27
SPIDR-201ENST00000297423 KLK13Q9UKR3 277 aa13.36□□□□□ -0.27
SPIDR-201ENST00000297423 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-201ENST00000297423 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
SPIDR-201ENST00000297423 ZNF318Q5VUA4 2279 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 FABP4P15090 132 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 MDKP21741 143 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 FHITP49789 147 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 RASGEF1BQ0VAM2 473 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 DPPA2Q7Z7J5 298 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 OR4C3Q8NH37 302 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 LINC00615Q96LM1 132 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 ZNF587Q96SQ5 575 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 GABRG3Q99928 467 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 HAO2Q9NYQ3 351 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 SLC17A2O00624 439 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 XRCC2O43543 280 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 HCRTR2O43614 444 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 AHSA1O95433 338 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 ITGB2P05107 769 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 THBS1P07996 1170 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 HCKP08631 526 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 SLC2A1P11166 492 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 ZNF84P51523 738 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CASP6P55212 293 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CYCSP99999 105 aaKnown RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 MEF2DQ14814 521 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CLEC12BQ2HXU8 276 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 LPCAT3Q6P1A2 487 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 OR13C8Q8NGS7 320 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CMTM3Q96MX0 182 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 GAR1Q9NY12 217 aaKnown RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 OR4C45A6NMZ5 311 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 ZNF205O95201 554 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CD14P08571 375 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 ALOX5APP20292 161 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 COL9A1P20849 921 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 EMP2P54851 167 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CSNK2A1P68400 391 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 GPX8Q8TED1 209 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-201ENST00000297423 CES1P1Q9UKY3 287 aa13.35□□□□□ -0.27
SPIDR-201ENST00000297423 NSA2O95478 260 aaKnown RBP13.34□□□□□ -0.27
SPIDR-201ENST00000297423 NR2C1P13056 603 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 CAV2P51636 162 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 SOHLH1Q5JUK2 328 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 LRP11Q86VZ4 500 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 ZDHHC12Q96GR4 267 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 B3GALT1Q9Y5Z6 326 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 TMEM14AQ9Y6G1 99 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 USP34Q70CQ2 3546 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 THEGLP0DJG4 465 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 AKT2P31751 481 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 PRPS1P60891 318 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
SPIDR-201ENST00000297423 RHEBQ15382 184 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 CDPF1Q6NVV7 123 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 UNQ9370/PRO34162Q6UXP9 181 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 SUMF2Q8NBJ7 301 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 TSACCQ96A04 125 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-201ENST00000297423 PHF7Q9BWX1 381 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-201ENST00000297423 MEMO1Q9Y316 297 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 KPTNQ9Y664 436 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 MRPS18BQ9Y676 258 aaKnown RBP13.34□□□□□ -0.27
SPIDR-201ENST00000297423 COLEC10Q9Y6Z7 277 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 FREM3P0C091 2139 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 CDH23Q9H251 3354 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 C9JQL5 133 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 TSTD3H0UI37 97 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 CYTIPO60759 359 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 FCGR2CP31995 323 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 ECH1Q13011 328 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 ZNF542PQ5EBM4 170 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 ADGRE4PQ86SQ3 457 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 LILRB2Q8N423 598 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 C15orf54Q8N8G6 183 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 COX14Q96I36 57 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 MRGPRX1Q96LB2 322 aa13.34□□□□□ -0.27
SPIDR-201ENST00000297423 LMX1BO60663 402 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 MPZL1O95297 269 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 HAGHQ16775 308 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 TMEM225Q6GV28 225 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 OR5H2Q8NGV7 314 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 EDARADDQ8WWZ3 215 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 CDC6Q99741 560 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 TEX101Q9BY14 249 aa13.33□□□□□ -0.27
SPIDR-201ENST00000297423 C19orf53Q9UNZ5 99 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms