RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SIRPB1O00241 398 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SULT1B1O43704 296 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 GPANK1O95872 356 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 ELP2Q6IA86 826 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR4D6Q8NGJ1 314 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 IGKV1-8A0A0C4DH67 115 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 TRIM64BA6NI03 449 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 GPR137BO60478 399 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 FAHP16930 419 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 CDK5Q00535 292 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 GSG1Q2KHT4 349 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 NOXA1Q86UR1 476 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 ZNF573Q86YE8 665 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SDSLQ96GA7 329 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 KIRREL1Q96J84 757 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 LOXL4Q96JB6 756 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 EXOSC3Q9NQT5 275 aaKnown RBP12.32□□□□□ -0.44
NPC1-201ENST00000269228 HAO2Q9NYQ3 351 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 A0A0B4J203 849 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 TCRBP04435 133 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 GALNSP34059 522 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 TPBGQ13641 420 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 TAF9Q16594 264 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 PHLDA2Q53GA4 152 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 STAC2Q6ZMT1 411 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SLC25A26Q70HW3 274 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 ZDHHC23Q8IYP9 409 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR1F12Q8NHA8 337 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 LRP12Q9Y561 859 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SLC22A23A1A5C7 686 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 ARPC3O15145 178 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 TUBG1P23258 451 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 HAAOP46952 286 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 SRP9P49458 86 aaKnown RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 MRGPREQ86SM8 312 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 ZNF808Q8N4W9 903 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 SULT4A1Q9BR01 284 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 METTL17Q9H7H0 456 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 RGS11O94810 467 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 PLXDC2Q6UX71 529 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 TMEM235A6NFC5 223 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 SNCAP37840 140 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 HMGA2P52926 109 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 SORDQ00796 357 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 ALKBH6Q3KRA9 238 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 LSRQ86X29 649 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 KCNJ15Q99712 375 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 RGCCQ9H4X1 137 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 TMEM74BQ9NUR3 256 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 AIPO00170 330 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 CDC42EP2O14613 210 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 MC2RQ01718 297 aa12.31□□□□□ -0.44
NPC1-201ENST00000269228 RGS7BPQ6MZT1 257 aaPredicted RBP12.31□□□□□ -0.44
NPC1-201ENST00000269228 FAM221AA4D161 298 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 NPIPB8E9PQR5 432 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SH2D1BO14796 132 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 RER1O15258 196 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 IFNA4P05014 189 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 CCL3P10147 92 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 CASP3P42574 277 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 GAB4Q2WGN9 574 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 DNASE2BQ8WZ79 361 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SLC35B4Q969S0 331 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 APOBEC3DQ96AK3 386 aaPredicted RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 SAV1Q9H4B6 383 aaPredicted RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 C1orf123Q9NWV4 160 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 KIR2DS1A0A191URI9 304 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 TSPAN15O95858 294 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 KIR2DS4P43632 304 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SLC25A1P53007 311 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 KIR2DS1Q14954 304 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 DCAF10Q5QP82 559 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SAP25Q8TEE9 199 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 SARGQ9BW04 601 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 WDR54Q9H977 334 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms