RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SULT1A2P50226 295 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 SLC18B1Q6NT16 456 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 OR13C3Q8NGS6 347 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 FAM3CQ92520 227 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 PTX4Q96A99 478 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 SSX3Q99909 188 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 PARP11Q9NR21 331 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 GDE1Q9NZC3 331 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 GDF2Q9UK05 429 aaPredicted RBP13.41□□□□□ -0.26
XRCC1-201ENST00000262887 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
XRCC1-201ENST00000262887 MEGF11A6BM72 1044 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 PPIHO43447 177 aaKnown RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 OIP5O43482 229 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 TNFSF14O43557 240 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 OR6A2O95222 327 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 IGFALSP35858 605 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 RNF4P78317 190 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 EGR4Q05215 589 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 ANKRD39Q53RE8 183 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 VITQ6UXI7 678 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 OR4D6Q8NGJ1 314 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 KTI12Q96EK9 354 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 LURAP1Q96LR2 239 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 PDE7BQ9NP56 450 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 FANCMQ8IYD8 2048 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 XKRYO14609 159 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 ADAP1O75689 374 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 CSTBP04080 98 aaKnown RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 PVRP15151 417 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 RAB6AP20340 208 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 SQSTM1Q13501 440 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 BCORP1Q8N888 145 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 OR10H5Q8NGA6 315 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 ZNF775Q96BV0 537 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-201ENST00000262887 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 MEGF10Q96KG7 1140 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 IP6K3Q96PC2 410 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 OR2M4Q96R27 311 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 RGCCQ9H4X1 137 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
XRCC1-201ENST00000262887 PRAMEF26H0Y7S4 382 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 RAB27BO00194 218 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 CSF2RAP15509 400 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 ID4P47928 161 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 GSK3AP49840 483 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 RAB5CP51148 216 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 OR2B8PP59922 312 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 EBPQ15125 230 aaKnown RBP13.4□□□□□ -0.27
XRCC1-201ENST00000262887 TMEM128Q5BJH2 165 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 ZNF440Q8IYI8 595 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 FRMD1Q8N878 549 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.27
XRCC1-201ENST00000262887 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.27
XRCC1-201ENST00000262887 RAB18Q9NP72 206 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 RAB22AQ9UL26 194 aa13.4□□□□□ -0.27
XRCC1-201ENST00000262887 C11orf98E9PRG8 122 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 M0R036 132 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 PMP2P02689 132 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 OR8U9P0C7N5 309 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 RAB38P57729 211 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 C1orf100Q5SVJ3 147 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 KCTD18Q6PI47 426 aaPredicted RBP13.39□□□□□ -0.27
XRCC1-201ENST00000262887 Q6ZRG5 221 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 MDGA2Q7Z553 956 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 HOGA1Q86XE5 327 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 KDF1Q8NAX2 398 aaPredicted RBP13.39□□□□□ -0.27
XRCC1-201ENST00000262887 OR8U1Q8NH10 309 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 FAM46BQ96A09 425 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 TOLLIPQ9H0E2 274 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 PPP4R1LQ9P1A2 415 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 PRSS38A1L453 326 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 TAAR5O14804 337 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 DAOP14920 347 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 ITGA3P26006 1051 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 ADH6P28332 368 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CASP6P55212 293 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 SLC9A3R2Q15599 337 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 NCMAPQ5T1S8 102 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CATSPERDQ86XM0 798 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 CSNK1A1LQ8N752 337 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 OR51F2Q8NH61 342 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 NEU1Q99519 415 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 HHLA2Q9UM44 414 aa13.39□□□□□ -0.27
XRCC1-201ENST00000262887 PLGP00747 810 aaPredicted RBP13.38□□□□□ -0.27
XRCC1-201ENST00000262887 RBP2P50120 134 aa13.38□□□□□ -0.27
XRCC1-201ENST00000262887 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
XRCC1-201ENST00000262887 CD226Q15762 336 aa13.38□□□□□ -0.27
XRCC1-201ENST00000262887 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
XRCC1-201ENST00000262887 CBLN3Q6UW01 205 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms