RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TMED4Q7Z7H5 227 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 NAA40Q86UY6 237 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF227Q86WZ6 799 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF385AQ96PM9 386 aaKnown RBP13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 CHST6Q9GZX3 395 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 PRMT8Q9NR22 394 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 SLC5A6Q9Y289 635 aa13.02□□□□□ -0.33
TRAFD1-201ENST00000257604 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 OR2M5A3KFT3 312 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 KRT33AO76009 404 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ACHEP22303 614 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 DYRK1AQ13627 763 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 HLXQ14774 488 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 UBE2NLQ5JXB2 153 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 WIPI1Q5MNZ9 446 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 OR51E1Q8TCB6 317 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 FCAMRQ8WWV6 532 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 SLAMF6Q96DU3 332 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ADAT1Q9BUB4 502 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 NPTNQ9Y639 398 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 NBASA2RRP1 2371 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ARPC4-TTLL3A0A0A6YYG9 625 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 TOR1AO14656 332 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 CREBL2O60519 120 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 TDGF1P13385 188 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ZP3P21754 424 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ITGA3P26006 1051 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 MAPK3P27361 379 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 SPEM2Q0P670 501 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 RASGEF1BQ0VAM2 473 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 HACD4Q5VWC8 232 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 TMEM88Q6PEY1 159 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 DNM1P34Q6PK57 102 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 OPN5Q6U736 354 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF283Q8N7M2 679 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 ACBD4Q8NC06 268 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 LILRB1Q8NHL6 650 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 CT55Q8WUE5 264 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 HES7Q9BYE0 225 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 NPDC1Q9NQX5 325 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 SESN1Q9Y6P5 492 aa13.01□□□□□ -0.33
TRAFD1-201ENST00000257604 DOCK10Q96BY6 2186 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 NPIPA2E9PIF3 369 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 NPIPA3F8WFD2 350 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 P04436 131 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 LAP3P28838 519 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 H2BFSP57053 126 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 SORDQ00796 357 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ATP1A1-AS1Q5TC04 95 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 LIN54Q6MZP7 749 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 RGS7BPQ6MZT1 257 aaPredicted RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 ELP5Q8TE02 316 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 TCFL5Q9UL49 500 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 FARSAQ9Y285 508 aaKnown RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 SPTA1P02549 2419 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 TGM6O95932 706 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 SP9P0CG40 484 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ABOP16442 354 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ANOS1P23352 680 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 EGR3Q06889 387 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 C2orf76Q3KRA6 126 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 SLC23A3Q6PIS1 610 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 GLDNQ6ZMI3 551 aaPredicted RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 OR52H1Q8NGJ2 320 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 CMBLQ96DG6 245 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 B3GAT1Q9P2W7 334 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 PFDN2Q9UHV9 154 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 ATPIF1Q9UII2 106 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 NUP210LQ5VU65 1888 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 SYT7O43581 403 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 IGHG1P01857 330 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 CD53P19397 219 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 SPINK2P20155 84 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 PTH2RP49190 550 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 TGIF1Q15583 401 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 PCGF3Q3KNV8 242 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM57BQ71RH2 274 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 IL22RA1Q8N6P7 574 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 TNFAIP8L1Q8WVP5 186 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
TRAFD1-201ENST00000257604 RADILQ96JH8 1075 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM74A7A6NL05 159 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
TRAFD1-201ENST00000257604 NTN3O00634 580 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms