RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CSAG2Q9Y5P2 127 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 MEIKINA0A087WXM9 373 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 LGALS8O00214 317 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 GPR37O15354 613 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 CSN1S1P47710 185 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 RAE1P78406 368 aaKnown RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 Q6ZRG5 221 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OR2G3Q8NGZ4 309 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 PLA2G3Q9NZ20 509 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 FBXL4Q9UKA2 621 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 SHROOM3Q8TF72 1996 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 SULT1C4O75897 302 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 MPLP40238 635 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 HAAOP46952 286 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 LYSMD2Q8IV50 215 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 UBAC2Q8NBM4 344 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OR2A1Q8NGT9 310 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 GAB3Q8WWW8 586 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 SPNS1Q9H2V7 528 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 EXO1Q9UQ84 846 aaKnown RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 SIX6O95475 246 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 MT-CO3P00414 261 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 LSRQ86X29 649 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 DEFB108BQ8NET1 73 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OR1L3Q8NH93 324 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 C3orf49Q96BT1 292 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 UGT2A1Q9Y4X1 527 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 SHISA8B8ZZ34 492 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 NKX2-1P43699 371 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 DHODHQ02127 395 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 IL11RAQ14626 422 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 TSEN54Q7Z6J9 526 aaKnown RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 KIAA1958Q8N8K9 716 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 KDF1Q8NAX2 398 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OR52I2Q8NH67 350 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 GPR119Q8TDV5 335 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 TTC9Q92623 222 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 RNF167Q9H6Y7 350 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 ISG20L2Q9H9L3 353 aaKnown RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 ZFP92A6NM28 416 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OIP5O43482 229 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 HPNP05981 417 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 OR10A3P58181 314 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 HTRA4P83105 476 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-201ENST00000254630 CD276Q5ZPR3 534 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 ADGRF3Q8IZF5 1079 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 GABRG1Q8N1C3 465 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 CORO2AQ92828 525 aa7.88□□□□□ -1.15
PTCD3-201ENST00000254630 A0A1B0GVG6 124 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 BHLHE40O14503 412 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 PPM1DO15297 605 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SPRY1O43609 319 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 HOXC4P09017 264 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ADRA2CP18825 462 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 THBS4P35443 961 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ADIRFQ15847 76 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM81Q6P7N7 255 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 PAQR6Q6TCH4 344 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 YIPF5Q969M3 257 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 TINAGL1Q9GZM7 467 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 TNFRSF12AQ9NP84 129 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ARFGEF1Q9Y6D6 1849 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 IGHV1OR15-9A0A0B4J2B8 117 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 H0Y8G0 127 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 LINC01387J3KSC0 135 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SPRY3O43610 288 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FCMRO60667 390 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 CISD3P0C7P0 127 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 COL9A1P20849 921 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 UBE2G1P62253 170 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 CLN3Q13286 438 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM104Q8NE00 496 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 OR1J1Q8NGS3 322 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ADAT1Q9BUB4 502 aaKnown RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 RNF32Q9H0A6 362 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FITM1A5D6W6 292 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 CYC1P08574 325 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 GP2P55259 537 aaKnown RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SPATA46Q5T0L3 261 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SLC38A6Q8IZM9 456 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 OSR2Q8N2R0 312 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SOX7Q9BT81 388 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FAM96BQ9Y3D0 163 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ABCD3P28288 659 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 S100A11P31949 105 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FLI1Q01543 452 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SMIM21Q3B7S5 101 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FAM199XQ6PEV8 388 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 OR2AK2Q8NG84 335 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 APH1BQ8WW43 257 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 JAM3Q9BX67 310 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 I6L893 689 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FUT6P51993 359 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 BTG1P62324 171 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SSPNQ14714 243 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 RNPS1Q15287 305 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms