RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PTGES2Q9H7Z7 377 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ZNF304Q9HCX3 659 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 KIF25Q9UIL4 384 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 SFTPBP07988 381 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 CD34P28906 385 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 MPGP29372 298 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 NXPH1P58417 271 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 CXADRP78310 365 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 GVQW1Q8N7I0 195 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 CLRN3Q8NCR9 226 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 OR1S1Q8NH92 325 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 SPACA5Q96QH8 159 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 USB1Q9BQ65 265 aaKnown RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 NUDT22Q9BRQ3 303 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 B3GAT1Q9P2W7 334 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 EML6Q6ZMW3 1958 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 TRBV23-1A0A0A0MS06 115 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 METTL21EPA6NDL7 271 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ZNF98A6NK75 572 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ZNF217O75362 1048 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 SLC25A12O75746 678 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 MELTFP08582 738 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 OR4E1P0C645 316 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 KLK2P20151 261 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 RAB3AP20336 220 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 FBLP22087 321 aaKnown RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 GPR85P60893 370 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 QRFPP83859 136 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 PMPCAQ10713 525 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 PAN3Q58A45 887 aaKnown RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 C3orf33Q6P1S2 294 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 TMEM200AQ86VY9 491 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 C12orf45Q8N5I9 185 aaPredicted RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 DCUN1D4Q92564 292 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ZDHHC12Q96GR4 267 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 EMC6Q9BV81 110 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 EDEM2Q9BV94 578 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 MTCH2Q9Y6C9 303 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 R4GMQ9 66 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 P2RY10O00398 339 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OPN1LWP04000 364 aa9□□□□□ -0.97
COPB1-201ENST00000249923 PGAM2P15259 253 aa9□□□□□ -0.97
COPB1-201ENST00000249923 FOSL2P15408 326 aa9□□□□□ -0.97
COPB1-201ENST00000249923 DNASE1L1P49184 302 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ARRB1P49407 418 aaPredicted RBP9□□□□□ -0.97
COPB1-201ENST00000249923 RNF4P78317 190 aa9□□□□□ -0.97
COPB1-201ENST00000249923 GUCA2BQ16661 112 aa9□□□□□ -0.97
COPB1-201ENST00000249923 FAM69BQ5VUD6 431 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ZNF813Q6ZN06 617 aa9□□□□□ -0.97
COPB1-201ENST00000249923 DTX1Q86Y01 620 aa9□□□□□ -0.97
COPB1-201ENST00000249923 BVESQ8NE79 360 aa9□□□□□ -0.97
COPB1-201ENST00000249923 MVB12AQ96EY5 273 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ADAT3Q96EY9 351 aaPredicted RBP9□□□□□ -0.97
COPB1-201ENST00000249923 METTL8Q9H825 291 aaKnown RBP9□□□□□ -0.97
COPB1-201ENST00000249923 CNTD2Q9H8S5 307 aa9□□□□□ -0.97
COPB1-201ENST00000249923 SLC17A5Q9NRA2 495 aa9□□□□□ -0.97
COPB1-201ENST00000249923 FAM206AQ9NX38 181 aa9□□□□□ -0.97
COPB1-201ENST00000249923 MBD2Q9UBB5 411 aa9□□□□□ -0.97
COPB1-201ENST00000249923 VSIG4Q9Y279 399 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
COPB1-201ENST00000249923 TRIM77I1YAP6 450 aa9□□□□□ -0.97
COPB1-201ENST00000249923 RAB27BO00194 218 aa9□□□□□ -0.97
COPB1-201ENST00000249923 PIAS2O75928 621 aa9□□□□□ -0.97
COPB1-201ENST00000249923 NFYBP25208 207 aa9□□□□□ -0.97
COPB1-201ENST00000249923 CALCRP30988 508 aa9□□□□□ -0.97
COPB1-201ENST00000249923 RIDAP52758 137 aaKnown RBP9□□□□□ -0.97
COPB1-201ENST00000249923 DCAF7P61962 342 aa9□□□□□ -0.97
COPB1-201ENST00000249923 GLO1Q04760 184 aa9□□□□□ -0.97
COPB1-201ENST00000249923 MFAP5Q13361 173 aa9□□□□□ -0.97
COPB1-201ENST00000249923 SLC9A3R2Q15599 337 aa9□□□□□ -0.97
COPB1-201ENST00000249923 PTCRAQ6ISU1 281 aaPredicted RBP9□□□□□ -0.97
COPB1-201ENST00000249923 CCDC36Q8IYA8 594 aa9□□□□□ -0.97
COPB1-201ENST00000249923 NFAM1Q8NET5 270 aaPredicted RBP9□□□□□ -0.97
COPB1-201ENST00000249923 OR1S2Q8NGQ3 325 aa9□□□□□ -0.97
COPB1-201ENST00000249923 LMAN1LQ9HAT1 526 aa9□□□□□ -0.97
COPB1-201ENST00000249923 SUSD2Q9UGT4 822 aa9□□□□□ -0.97
COPB1-201ENST00000249923 VDAC3Q9Y277 283 aa9□□□□□ -0.97
COPB1-201ENST00000249923 POLR1DQ9Y2S0 133 aa9□□□□□ -0.97
COPB1-201ENST00000249923 KNTC1P50748 2209 aa9□□□□□ -0.97
COPB1-201ENST00000249923 TNFSF12-TNFSF13A0A0A6YY99 330 aa9□□□□□ -0.97
COPB1-201ENST00000249923 A0A1B0GTI1 187 aa9□□□□□ -0.97
COPB1-201ENST00000249923 RHPN2P1A8MT19 583 aa9□□□□□ -0.97
COPB1-201ENST00000249923 TNFSF12O43508 249 aa9□□□□□ -0.97
COPB1-201ENST00000249923 HTR3BO95264 441 aa9□□□□□ -0.97
COPB1-201ENST00000249923 CD74P04233 296 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ISG15P05161 165 aa9□□□□□ -0.97
COPB1-201ENST00000249923 ZNF14P17017 642 aaPredicted RBP9□□□□□ -0.97
COPB1-201ENST00000249923 NAGAP17050 411 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OR2B8PP59922 312 aa9□□□□□ -0.97
COPB1-201ENST00000249923 PDZK1IP1Q13113 114 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OR52W1Q6IF63 320 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OR52N4Q8NGI2 321 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OR13C3Q8NGS6 347 aa9□□□□□ -0.97
COPB1-201ENST00000249923 CD300LFQ8TDQ1 290 aa9□□□□□ -0.97
COPB1-201ENST00000249923 C15orf40Q8WUR7 153 aa9□□□□□ -0.97
COPB1-201ENST00000249923 SEMA5BQ9P283 1151 aa9□□□□□ -0.97
COPB1-201ENST00000249923 OR52A1Q9UKL2 312 aa9□□□□□ -0.97
COPB1-201ENST00000249923 CA14Q9ULX7 337 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms