RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 VEGFCP49767 419 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 RIDAP52758 137 aaKnown RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 CLDN12P56749 244 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ZP1P60852 638 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 LCN6P62502 163 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 GLO1Q04760 184 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 RBMS2Q15434 407 aaKnown RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 TOMM34Q15785 309 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 RAB11BQ15907 218 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 MEP1BQ16820 701 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ESCO2Q56NI9 601 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 NKAIN2Q5VXU1 208 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF626Q68DY1 528 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 FAM166AQ6J272 317 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 DEGS2Q6QHC5 323 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 RAB11FIP2Q7L804 512 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ADGRG3Q86Y34 549 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 PRR22Q8IZ63 422 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 UXS1Q8NBZ7 420 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF680Q8NEM1 530 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 DNAAF1Q8NEP3 725 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 OR11H4Q8NGC9 324 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 OR8H1Q8NGG4 311 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 C8orf44Q96CB5 159 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ORAI1Q96D31 301 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 OR2A7Q96R45 310 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 PRRX2Q99811 253 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 KLHDC3Q9BQ90 382 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 SEMA4CQ9C0C4 833 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 VN1R1Q9GZP7 353 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 HEXA-AS1Q9H8Q6 139 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 DHCR7Q9UBM7 475 aaKnown RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 KLK11Q9UBX7 282 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 KCNG2Q9UJ96 466 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 AUP1Q9Y679 476 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 ANKUB1A6NFN9 424 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 FTCDNL1E5RQL4 147 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 ADAM10O14672 748 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 ARPC1BO15143 372 aaKnown RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 PRKNO60260 465 aaPredicted RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 CTAG2O75638 210 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 ISG15P05161 165 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 NAGAP17050 411 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 MAGEB1P43366 347 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 DAP3P51398 398 aaKnown RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 EFNA3P52797 238 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 OR1D5P58170 312 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 PCK2Q16822 640 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 TMEM255AQ5JRV8 349 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 GLT8D1Q68CQ7 371 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 FAM198BQ6UWH4 519 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 RABEPKQ7Z6M1 372 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 KRT77Q7Z794 578 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 CATSPERDQ86XM0 798 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 SERPINA12Q8IW75 414 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 BMPERQ8N8U9 685 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 BEST4Q8NFU0 473 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 OR2T35Q8NGX2 323 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 OR6N1Q8NGY5 312 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 OR52N5Q8NH56 324 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 MFSD8Q8NHS3 518 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 NUBPLQ8TB37 319 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 TSEN15Q8WW01 171 aaKnown RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 DNASE2BQ8WZ79 361 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 PTX4Q96A99 478 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF501Q96CX3 271 aaPredicted RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 AMELYQ99218 206 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 OR10A4Q9H209 315 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 SLCO5A1Q9H2Y9 848 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 FANCFQ9NPI8 374 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 MRPL22Q9NWU5 206 aaKnown RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 NKIRAS2Q9NYR9 191 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 LUZP4Q9P127 313 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 CKLFQ9UBR5 152 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 PISDQ9UG56 409 aa6.97□□□□□ -1.29
CXCR4-201ENST00000241393 PPIEQ9UNP9 301 aaKnown RBP6.97□□□□□ -1.29
CXCR4-201ENST00000241393 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CIB4A0PJX0 185 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 C11orf98E9PRG8 122 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 G3V3Q6 166 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF208O43345 1280 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SLC16A7O60669 478 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 AQP8O94778 261 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ACTL6BO94805 426 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 RGS11O94810 467 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 HLA-DQA2P01906 255 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 MAS1P04201 325 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ALDOBP05062 364 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SPARCP09486 303 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 AKAIN1P0CW23 69 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 FOLR1P15328 257 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CTLA4P16410 223 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 IGFBP3P17936 291 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ACHEP22303 614 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CCKBRP32239 447 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 DCTDP32321 178 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms